Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 505 a.a., ABC transporter substrate binding protein (dipeptide) from Agrobacterium fabrum C58

 Score =  822 bits (2122), Expect = 0.0
 Identities = 404/504 (80%), Positives = 449/504 (89%), Gaps = 5/504 (0%)

Query: 3   MKRTLIMGALM-----LGSALAPAFAASGPVKIVLPEEADLLEPCMATRSNIGRIIMQNV 57
           MK + + GA++      GS +APA AAS  +KIVLPEEADLLEPCMATRSNIGR+IM+NV
Sbjct: 1   MKTSRLFGAILGSVLAFGSGIAPANAASTDIKIVLPEEADLLEPCMATRSNIGRVIMENV 60

Query: 58  SETLTELDVREGKGLMPRLAESWEQKEDGSWRFNLRTGVKFSDGTDFNAKDVKYSFDRVM 117
           SETLTELDVR  +G+MPRLAE WEQ  D +WRF+LR GVKFSDG  F AKDVKYSFDR+ 
Sbjct: 61  SETLTELDVRGKQGVMPRLAEKWEQTGDSAWRFHLRQGVKFSDGKTFGAKDVKYSFDRIF 120

Query: 118 SDKNACESRRYFGGMNIKIDVVDDTTVDFTVDPVQPILPLLLSLLTIVPEETPMEFVREP 177
           SDKN CESRRYFGGM   + VVDD T+DF VDPVQPILPLLLSL+TIVP+ TP+ FVREP
Sbjct: 121 SDKNICESRRYFGGMKFDVKVVDDNTIDFKVDPVQPILPLLLSLVTIVPDGTPLAFVREP 180

Query: 178 VGTGPYKLTDWTPGQQIVLSARDDYWGEKPEVTEATYLFRADPAVRAAMVQTGEADLSPS 237
           +GTGPYKL++WTPGQQIVL ARDDYWG+KP VT+ATYLFRADPAVRAAMVQ GEADL+PS
Sbjct: 181 IGTGPYKLSNWTPGQQIVLDARDDYWGKKPAVTKATYLFRADPAVRAAMVQAGEADLAPS 240

Query: 238 ISQTEATNPATDFSYLDSETVYLRIDHNIEPLNDVRIRRALNLAIDREAFLGTLVPDSAV 297
           ISQ +ATN  TDFSYLDSETVYLR+D NI PLNDVR+R+ALNLAIDR+AF+GTLVP  AV
Sbjct: 241 ISQVDATNDKTDFSYLDSETVYLRLDGNIAPLNDVRVRKALNLAIDRQAFIGTLVPQDAV 300

Query: 298 LATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEAKADGVKVDTPITIIARTANFPNVTEI 357
           LATA+VPP TLGWNPDVKVFPYDP+QAKKL+EEAKA GV VD PITIIARTANFPNVTEI
Sbjct: 301 LATALVPPTTLGWNPDVKVFPYDPDQAKKLLEEAKAGGVPVDNPITIIARTANFPNVTEI 360

Query: 358 MEAIQAQLQEVGLKVELKFVEVAEHEVYYSKPFKEGRGPQLVAAMHDNSKGDPSFSMFFK 417
           MEA+QAQLQ+VG KVEL+FVEVAEHEVYYSKPFKEGRGPQ+VAAMHDNSKGDPSF+MFFK
Sbjct: 361 MEAVQAQLQDVGFKVELRFVEVAEHEVYYSKPFKEGRGPQIVAAMHDNSKGDPSFTMFFK 420

Query: 418 YDSEGTQSGFSDPKVDDLIARASAAVGDERAKLWSEVIAYVHDEVVADVLLFHMVGFSRV 477
           YD+ GTQSGFSD  VDDLI RASAA GDERAKLWS++IAYVHD++VADVLLFHMVG+SRV
Sbjct: 421 YDTNGTQSGFSDKNVDDLIKRASAATGDERAKLWSQLIAYVHDDLVADVLLFHMVGYSRV 480

Query: 478 SERLDFKPTMATNSMLQLSEIKIK 501
           SERLDFKPT+ATNSMLQLSEI  K
Sbjct: 481 SERLDFKPTIATNSMLQLSEIGFK 504