Pairwise Alignments

Query, 501 a.a., ABC transporter oligopeptide-binding protein from Sinorhizobium meliloti 1021

Subject, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  126 bits (316), Expect = 2e-33
 Identities = 131/507 (25%), Positives = 213/507 (42%), Gaps = 64/507 (12%)

Query: 4   KRTLIMGALMLGSALAPAF-------AASGPVKIVLPEEADLLEPCMATRSNIGRIIMQN 56
           +R  ++ ++ LG    P         A+ G   +++  E  +L     T  N    I   
Sbjct: 9   RRGFLLASVALGVVSLPGLKLNAAEPASGGTATLLISSEPPVLTTIAHTAYN-SVYISPK 67

Query: 57  VSETLTELDVREGKGLMPRLAESWEQKEDG-SWRFNLRTGVKFSDGTDFNAKDVKYSFDR 115
           V+E L   D        P LA+SW+   DG  + FNLR GVK+ DG  F + DV +S   
Sbjct: 68  VTEGLLTYDFDLNP--KPLLAKSWDVSADGLRYTFNLRPGVKWHDGKPFTSADVAFSIST 125

Query: 116 VMSDKNACESRRYFGGMNIKIDVVDDTTVDFTVDPVQPILPLLLSLLT--IVPE------ 167
           +         R  F  +   ++  ++ T    +    P L   L+     IVP+      
Sbjct: 126 IKEVHP--RGRNTFLNLTA-VETPNELTAVLVLSKPAPYLITALAAAETPIVPKHLYEGT 182

Query: 168 ---ETPMEFVREPVGTGPYKLTDWTPGQQIVLSARDDYW-GEKPEVTEATYLFRADPAVR 223
              E P+     P+GTGP+K  +W  G  IV     DYW   +P +      F  D + R
Sbjct: 183 KVTENPVNLA--PIGTGPFKFKEWVRGSHIVFERNADYWDAPRPYLDRLIVRFIPDASAR 240

Query: 224 AAMVQTGEADLSPSISQT--------EATNPATDFSYLDSETVYLRIDHNIEP--LNDVR 273
           A  ++TGE DL+PS            E  +   D +         R++ N+E     DVR
Sbjct: 241 AIAIETGEIDLAPSTPVAYSDLDRLKELPSLGFDTNGYQYTNSISRVEFNLEKDVFKDVR 300

Query: 274 IRRALNLAIDREAFLGTL-VPDSAVLATAIVPPPTLGWNPDVKVFPYDPEQAKKLIEEA- 331
           +RRA    IDR     T+     A +A  I P  T  +  D+K +P D + A+ L++EA 
Sbjct: 301 VRRAFAHVIDRNVIFNTVNFGYGATIAGPINPKLTKWFVNDLKTYPIDLKAAEALLDEAG 360

Query: 332 ---KADGVKVDTPITIIARTANFPNVTEIMEAIQAQLQEVGLKVELKFVEVAEH--EVYY 386
               ADG++    +  +  T  +P   +    I+  L +VG+ V ++  + A +   +Y 
Sbjct: 361 YKRGADGIRFKLNLDYVPSTEAYPRGADY---IRQALAKVGVDVTVRTQDFATYTKRIYT 417

Query: 387 SKPFKEGRGPQLVAAMHDNSKGDPSFSMFFKYDSEGTQSG--------FSDPKVDDLIAR 438
            + F         A    ++  DP+  +   Y S+  + G        +S+PKVD L+  
Sbjct: 418 DRDFD-------FAYEGMSNLFDPTVGVQRLYWSKNFKKGVPFSNGAAYSNPKVDALLEA 470

Query: 439 ASAAVG-DERAKLWSEVIAYVHDEVVA 464
           A+  +  D+R   W E+   + ++V A
Sbjct: 471 AAIEIDPDKRVAQWKEIQQILVEDVPA 497