Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 334 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  200 bits (509), Expect = 3e-56
 Identities = 116/338 (34%), Positives = 181/338 (53%), Gaps = 38/338 (11%)

Query: 1   MLRFIRQRALASLISLIGLIVMVF-FLSRMTGDPAALF-----LPVEASAEMKEQFRELH 54
           M RF+  R    + + IG+ ++ F F+  + GDP AL      +  E  AE+  Q     
Sbjct: 1   MFRFLLGRLAVLIPTFIGVSIIAFSFIRLLPGDPVALLSGERVMSPERHAEISHQL---- 56

Query: 55  GLNDPILVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIV 114
           G + PI++Q+  Y+  V+ GD G S+   +P +D  +E F  T+ L++  +       I 
Sbjct: 57  GFDRPIVMQYLDYLWGVLQGDFGTSIVTKKPVIDQFMELFPATVELSLCAIIFAVVVGIP 116

Query: 115 VGSLGAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVV---- 170
            G + A + G  FD++    +LIG S+P FW  ++ I++ S      P SG  S++    
Sbjct: 117 AGVVAAVKRGSIFDQIIMGTALIGFSMPIFWWGLLLIIVVSGILQWTPVSGRISLMFFFP 176

Query: 171 ------------------------HWILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKT 206
                                   H ILP  VL   P  +I +  R +M+  LS  YV+T
Sbjct: 177 SVTGFMLVDSLLSGQEGAFQSAFNHLILPTIVLGTIPLAVIARQTRSAMLEVLSEDYVRT 236

Query: 207 ARAKGVKSGPIIFIHALRNAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSIL 266
           ARAKG+ +  ++ IHALRNAM+PV+T +G Q   +L GA++ ETIF +PG+GK M+DS+ 
Sbjct: 237 ARAKGLSTFRVVGIHALRNAMIPVVTTIGLQIGVMLAGAILTETIFSWPGIGKWMVDSVF 296

Query: 267 QRDFNVVLAAILVTAIAIFLMNVLIDLAYALLDPRIRH 304
           +RD+ V+   +L+ A  I L+N+ +DL Y L++PRIRH
Sbjct: 297 RRDYAVIQGGLLIIAAVIMLVNLAVDLLYGLINPRIRH 334