Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  205 bits (522), Expect = 1e-57
 Identities = 123/334 (36%), Positives = 177/334 (52%), Gaps = 30/334 (8%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMT-GDPAALFLPVE-ASAEMKEQFRELHGLND 58
           ML FI +R    + +  G+ ++ F L R+  GDP  + +       EM  Q  E  GLN 
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 59  PILVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSL 118
           P+ VQ+  YVG +  GDLGESLR         L  F  TL LA   +       ++ G +
Sbjct: 61  PLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVI 120

Query: 119 GAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSG-----------TG 167
            A + G  FD     +SL G S+P FW  ++ I+ FS++    P SG           TG
Sbjct: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTG 180

Query: 168 -----------------SVVHWILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAK 210
                            +V+H ILP  VL   P  +I ++ R SM+  L   Y++TARAK
Sbjct: 181 FMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAK 240

Query: 211 GVKSGPIIFIHALRNAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDF 270
           G+    ++F+H LRNA++PV+TV G Q  +LL GAV+ ETIF +PG+GK +I++I  RD+
Sbjct: 241 GLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY 300

Query: 271 NVVLAAILVTAIAIFLMNVLIDLAYALLDPRIRH 304
            VV   IL+ A  + L+N ++D+ Y L +PRIRH
Sbjct: 301 PVVQNGILLIACLVILVNFVVDILYGLANPRIRH 334