Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., oligopeptide ABC transporter permease OppB from Escherichia coli ECRC100

 Score =  171 bits (434), Expect = 1e-47
 Identities = 100/310 (32%), Positives = 172/310 (55%), Gaps = 10/310 (3%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMT-GDP--AALFLPVEASAEMKEQFRELHGLN 57
           ML+FI +R L ++ +L  LI + FF+ R+  G P      LP E  A ++ ++     LN
Sbjct: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYH----LN 56

Query: 58  DPILVQFARYVGDVVTGDLGESLR-KARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVG 116
           DPI+ Q+  Y+  +  GD G S + K     D+V  +F  +  L      L     +  G
Sbjct: 57  DPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAG 116

Query: 117 SLGAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGT--GSVVHWIL 174
            + A +    +D     +++ G  +P F +A + ++IF+I    LP  G   G++   IL
Sbjct: 117 VIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMIL 176

Query: 175 PIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVV 234
           P+  L +     I ++ RGSM+  L S +++TARAKG+    II  HAL+ A+LPV++ +
Sbjct: 177 PMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYM 236

Query: 235 GDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLIDLA 294
           G     ++ G++V+ETI+G PG+G+L ++  L RD+++VL+  ++      L N ++D+ 
Sbjct: 237 GPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVL 296

Query: 295 YALLDPRIRH 304
           YA++DP+IR+
Sbjct: 297 YAVIDPKIRY 306