Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., oligopeptide ABC transporter permease OppB from Dickeya dianthicola ME23

 Score =  173 bits (439), Expect = 4e-48
 Identities = 102/312 (32%), Positives = 173/312 (55%), Gaps = 14/312 (4%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMTGDPAALF-----LPVEASAEMKEQFRELHG 55
           ML+FI +R L ++ +L  LI + FF+ R+   P + F     LP E  A ++ ++     
Sbjct: 1   MLKFIFRRCLEAIPTLFILITISFFMMRLA--PGSPFTGERNLPPEVMANIEAKYH---- 54

Query: 56  LNDPILVQFARYVGDVVTGDLGESLR-KARPALDVVLEAFTWTLWLAVITMTLVTGAAIV 114
           LNDP++ Q+  Y+  ++ GD G S + K     D+V+ AF  +  L      L     + 
Sbjct: 55  LNDPMIKQYGNYLVQLLKGDFGPSFKYKDYSVNDLVVRAFPVSAKLGAAAFLLAVVLGVT 114

Query: 115 VGSLGAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGT--GSVVHW 172
            G + A      +D      ++ G  +P F +A + ++IF+I    LP  G   G+  + 
Sbjct: 115 SGVIAALNQNSKWDYTVMGFAMTGVVIPSFVVAPLLVLIFAITLRWLPGGGWNGGAPKYI 174

Query: 173 ILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVIT 232
           ILP+  L +     I ++ RGSM+  L S +++TARAKG+    II  HAL+ A+LPV++
Sbjct: 175 ILPMVALSLSYIASIARITRGSMIEVLHSNFIRTARAKGLPLRRIILRHALKPALLPVLS 234

Query: 233 VVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLID 292
            +G     ++ G++V+ETIFG PG+G+L ++  L RD+++VL+  ++      L N +ID
Sbjct: 235 YMGPAFVGIITGSMVIETIFGLPGIGQLFVNGALNRDYSLVLSLTVLVGALTILFNAVID 294

Query: 293 LAYALLDPRIRH 304
           + YA++DP+IR+
Sbjct: 295 VLYAVIDPKIRY 306