Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., Dipeptide transport system permease protein DppB from Azospirillum sp. SherDot2

 Score =  204 bits (520), Expect = 2e-57
 Identities = 108/313 (34%), Positives = 187/313 (59%), Gaps = 9/313 (2%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMT-GDPAALFLPVEASAEMKEQFRELHGLNDP 59
           ML +I +R    ++ ++ + ++VF ++R+  GDPAA+ L   A+ +     R   GL++P
Sbjct: 1   MLVYIVRRFAGMMVVMLLVAMVVFLIARVVPGDPAAVMLGSSATPDDIAALRGRLGLDEP 60

Query: 60  ILVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSLG 119
           +L QF  Y+G +V  DLG+S+   RP    + E    T  L ++++ +     + VG L 
Sbjct: 61  LLTQFLLYLGQIVRFDLGDSIFLNRPVAQALAERSELTGLLTMMSVGIAMLIGVPVGILS 120

Query: 120 AFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGS--------VVH 171
           A + GG  D+ +  ++++ AS+P FW+ +  I   +++ A  P +G G         + H
Sbjct: 121 AAKRGGLVDQTAVGLAMLAASIPSFWIGLTLIKYLAVDHAWFPVAGYGPPDADLLERMRH 180

Query: 172 WILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVI 231
            +LP   L +    +I++  R SM+  +S  YV+TARAKG+    ++  HALRNAM+P++
Sbjct: 181 LVLPAIALGIPNSALILRFTRTSMLDVMSHDYVRTARAKGLPPLVVVLKHALRNAMIPIL 240

Query: 232 TVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLI 291
           TV+G   A ++ GA+V ET+FG PGVG L++ ++L+RD+ V+  A+LV +    L+N+ +
Sbjct: 241 TVIGLTTAVMIAGAIVTETVFGLPGVGNLIVSAVLRRDYPVIQGALLVVSAIYVLINLTV 300

Query: 292 DLAYALLDPRIRH 304
           DL YA++DPR+R+
Sbjct: 301 DLLYAVVDPRVRY 313