Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 315 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  206 bits (524), Expect = 6e-58
 Identities = 117/309 (37%), Positives = 179/309 (57%), Gaps = 9/309 (2%)

Query: 4   FIRQRALASLISLIGLIVMVFFLSRMT-GDPAALFLPVEASAEMKEQFRELHGLNDPILV 62
           +I +R L ++ +L+ + + VF L ++  GDP       E      E  RE + LNDP+ +
Sbjct: 4   YIGKRLLVAIPTLLIISIFVFSLQKLLPGDPVLAMAGEERDPATIEFLREKYRLNDPVPL 63

Query: 63  QFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSLGAFR 122
           Q+  ++G VVTGD G SLR  +P L+++ +    T+ LAV+ M       I +G L A +
Sbjct: 64  QYLNWLGGVVTGDFGISLRTNQPVLELIGQKLPVTIQLAVMAMFFAMVIGIPIGILAAVK 123

Query: 123 SGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSG--------TGSVVHWIL 174
              + D  +++V+L G S+P+FWL I+ I++ S+    LP SG          S+   I+
Sbjct: 124 KNTWIDYTANIVALSGLSIPNFWLGIMLILLVSVKLGWLPASGYESIFVDPVRSIETMIM 183

Query: 175 PIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALRNAMLPVITVV 234
           P  VL       +++  R +MV+ LSS Y++TARAKG+    II  H+ RNA+LPVIT++
Sbjct: 184 PAFVLGNALAATLMRHTRSAMVAVLSSDYIRTARAKGLSPREIILSHSFRNALLPVITLL 243

Query: 235 GDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAIFLMNVLIDLA 294
                 LL GAV+ E IF  PG GK+ +D++  RD+ VV   +L TA+   LMN+L D+A
Sbjct: 244 ALLFGELLAGAVLTEQIFTIPGFGKMTVDAVFTRDYAVVQGIVLCTAVGFILMNLLADIA 303

Query: 295 YALLDPRIR 303
           Y LL+PR+R
Sbjct: 304 YVLLNPRLR 312