Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  182 bits (463), Expect = 7e-51
 Identities = 101/319 (31%), Positives = 172/319 (53%), Gaps = 16/319 (5%)

Query: 1   MLRFIRQRALASLISLIGLIVMVFFLSRMTGDPAALFLPVEASAEMKEQFRELHGLNDPI 60
           ML FI +R   +++ ++ + ++ F + R+ GDP  L +  + S E +   RE  GLND +
Sbjct: 1   MLVFIIKRLGNAVLVMLSVALIAFLIFRLAGDPVELMVGEQTSQEDRAALRERLGLNDSL 60

Query: 61  LVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSLGA 120
             Q+ R+V D   G+ G S R  +  L ++ E F  TL L ++   +     + +G L A
Sbjct: 61  PTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLGVLTA 120

Query: 121 FRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVVH---W----- 172
            R G ++      +S++G S+P F + I+ I++FS++    P  G G VV    W     
Sbjct: 121 IRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWSTGLL 180

Query: 173 --------ILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAKGVKSGPIIFIHALR 224
                   ILP   L +    +++++VR  M+  L S +VK ARA+G+    I F HALR
Sbjct: 181 TSSGRAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFRHALR 240

Query: 225 NAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAIAI 284
           N ++PV+T+      SL+  A++ ET+F +PG+G L I ++   D  V+ A + + +   
Sbjct: 241 NCLMPVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCIISFIF 300

Query: 285 FLMNVLIDLAYALLDPRIR 303
            ++N  +D+AYA++DPR+R
Sbjct: 301 VVLNTFVDIAYAVIDPRLR 319