Pairwise Alignments

Query, 304 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  209 bits (532), Expect = 7e-59
 Identities = 121/334 (36%), Positives = 184/334 (55%), Gaps = 30/334 (8%)

Query: 1   MLRFIRQRALASLISLIGLIVMVF-FLSRMTGDPAALFLPVEA-SAEMKEQFRELHGLND 58
           M+RFI  + L  + + +G+ ++ F F+  + GDP  L       S E   Q  E  G   
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPVLLMAGERGISPERHAQLAEQLGFAQ 60

Query: 59  PILVQFARYVGDVVTGDLGESLRKARPALDVVLEAFTWTLWLAVITMTLVTGAAIVVGSL 118
           PI  Q+  ++G ++ GDLG SL   +P L   L  F  T+ L ++ + + T   + VG +
Sbjct: 61  PIWEQYLHFLGRLLQGDLGNSLVTKKPVLTEFLALFPATVELGLVAIIIATVIGVPVGVI 120

Query: 119 GAFRSGGFFDRLSSMVSLIGASVPDFWLAIVAIVIFSINFAILPTSGTGSVV-------- 170
            A R G +FD++S   +L+G S+P FW  ++ I++FS      P SG  S++        
Sbjct: 121 AAIRRGSWFDQISMTTALVGFSMPIFWWGLLLIIMFSGILQWTPVSGRISLMYFFPSVTG 180

Query: 171 --------------------HWILPIAVLFVRPFGIIVQVVRGSMVSALSSAYVKTARAK 210
                               H ILP  VL   P  +I +  R +M+  L   YV+TARAK
Sbjct: 181 FMLIDSLISGQKGAFASALSHLILPSVVLATIPLAVIARQTRSAMLEVLGEDYVRTARAK 240

Query: 211 GVKSGPIIFIHALRNAMLPVITVVGDQAASLLNGAVVVETIFGFPGVGKLMIDSILQRDF 270
           G+ +  ++ IHALRNAM+PVIT +G Q   L+ GA++ ETIF +PG+GK MIDSI +RD+
Sbjct: 241 GMSASRVVGIHALRNAMIPVITTIGLQIGVLMAGAILTETIFSWPGIGKWMIDSISRRDY 300

Query: 271 NVVLAAILVTAIAIFLMNVLIDLAYALLDPRIRH 304
            VV + +L+ A  + ++N+L+DL Y L++PRIRH
Sbjct: 301 PVVQSGLLLIAGLVMVVNLLVDLTYGLINPRIRH 334