Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 303 a.a., Dipeptide ABC transporter, permease protein DppC from Pseudomonas sp. S08-1

 Score =  194 bits (493), Expect = 2e-54
 Identities = 101/269 (37%), Positives = 163/269 (60%), Gaps = 3/269 (1%)

Query: 27  DKFALCAAIFLLVILTIAIIGPPWLGDLATKQNLRGRNLPPFDWTRTWV--WWMGADALG 84
           +K A+   +F+LVI+  A+  P W+      +  R   L P  W       + +G D LG
Sbjct: 30  NKGAVGGLLFMLVIVFCALFAP-WVAPFDPSEQFRDALLTPPSWLEGGQARFLLGTDELG 88

Query: 85  RPLFARIIVAAQNTLMVAAGAVILSSVIGTVLGLIAGFSSPRMSQIIMRLADVIMSFPSL 144
           R L +R+I  A+ +LM+   +V++S + G ++GL+AGF    +   IMRL D++++ PSL
Sbjct: 89  RDLLSRLIHGARLSLMIGLASVLMSLIPGILMGLVAGFFPRLLGPSIMRLMDIMLALPSL 148

Query: 145 LIAVIVLYVLGSSILNLMLVLAITRIPVYLRTTRAEVLEIRERMFVQAARVMGASSKRIL 204
           L+AV ++ +LG  ++N ++ +AI  +P Y+R TRA V+    R +V AAR+ GA   R++
Sbjct: 149 LLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELGRDYVTAARLAGAGLPRLM 208

Query: 205 FRHILPVVLPTLTTLATLDFAYVMLAESALSFLGIGIQPPEITWGLMISQGRQYLTNAWW 264
           F  +LP  +  L   ATL F+  +L  +AL FLG+G+QPP   WG M++  R Y+  AWW
Sbjct: 209 FVTVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWW 268

Query: 265 LSFWPGLAIILTTMSLNLLSNWMRIALDP 293
           +   PGL I+L+ +++NL+ + +R ALDP
Sbjct: 269 VVSLPGLTILLSVLAINLMGDGLRDALDP 297