Pairwise Alignments

Query, 307 a.a., oligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC98

 Score =  188 bits (478), Expect = 1e-52
 Identities = 98/276 (35%), Positives = 158/276 (57%), Gaps = 7/276 (2%)

Query: 19  RMMRMLLADKFALCAAIFLLVILTIAIIGPPWLGDLATKQ-NLRGRNLPPFDWTRTWVWW 77
           +++ ML      +  A+ ++V++ + +I  PWL        +L  R LPP     +   W
Sbjct: 22  KLVWMLKGSPLTVTGAV-IIVLMLLMMIFSPWLATHDPNAIDLTARLLPP-----SAAHW 75

Query: 78  MGADALGRPLFARIIVAAQNTLMVAAGAVILSSVIGTVLGLIAGFSSPRMSQIIMRLADV 137
            G D +GR LF+R++V +Q +++     V ++ +IG++LG ++G    R   IIMR+ D+
Sbjct: 76  FGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDI 135

Query: 138 IMSFPSLLIAVIVLYVLGSSILNLMLVLAITRIPVYLRTTRAEVLEIRERMFVQAARVMG 197
           ++S PSL++ + +   LG S+ N ML +AI RIP Y+R  R + L +R+  +VQAA+  G
Sbjct: 136 MLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFG 195

Query: 198 ASSKRILFRHILPVVLPTLTTLATLDFAYVMLAESALSFLGIGIQPPEITWGLMISQGRQ 257
           AS   ++  HIL   LP L   A+LD    +L  + L F+G+G Q P   WG M++ GR 
Sbjct: 196 ASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRN 255

Query: 258 YLTNAWWLSFWPGLAIILTTMSLNLLSNWMRIALDP 293
           Y+ + WW   +PG AI+LT +  NL  + +R  LDP
Sbjct: 256 YVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDP 291