Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  468 bits (1204), Expect = e-136
 Identities = 259/529 (48%), Positives = 354/529 (66%), Gaps = 16/529 (3%)

Query: 3   EHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMP 62
           ++L+E+R+LSVEF T       V ++S+ + +GET+A++GESGSGKSV++ +I+ L+  P
Sbjct: 4   DNLIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPYP 63

Query: 63  PGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH 122
             R  SG I   G+DLLT+  +  R + G R+AMIFQ+P++ LNP++S+  QI+E +  H
Sbjct: 64  LARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLH 123

Query: 123 -GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADE 181
            GL G  A +  L LL  VGIPEP + ++  PHE SGGQRQRVMIAMALA  P+LLIADE
Sbjct: 124 KGLQGKVATQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183

Query: 182 PTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVR 241
           PTTALDVTVQ ++L+LLKELQ   GMA+L+I+HDL +V  IA RV VM+KG IVE     
Sbjct: 184 PTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQADCE 243

Query: 242 EIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRD-----------VRKTYGSFEA 290
            ++++PQHPYTQ+L+AA P  G      A   PLL V +           +R T    +A
Sbjct: 244 TLFQSPQHPYTQELLAAEPSGGP--ASNAIGPPLLEVDNLKVWFPIKKGFLRNTVDYVKA 301

Query: 291 LKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKL 350
           + GI+F L  G+T+ +VGESGSGKSTL  A+LRL     G   ++G+ L  LS  ++  L
Sbjct: 302 VDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIASKGGIR-FEGQQLDTLSQQQVRPL 360

Query: 351 RRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMS 410
           RR++Q+VFQDP  SL+PRM V +++ E   IH    P A+    +   L +VGL  E   
Sbjct: 361 RREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHKMGTP-AEQEAAIIAALKEVGLDPESRH 419

Query: 411 RYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFI 470
           RYPH+FSGGQRQRIAIARAL L+P+LI+ DE  SALD +VQ QV+ELL  L+ +  + ++
Sbjct: 420 RYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYL 479

Query: 471 FIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAAS 519
           FI+HDL VV+  +  +MV++ G+VVE G   E+F  P+  YTR LL A+
Sbjct: 480 FISHDLAVVKALSHQLMVVKHGQVVEQGDAAEIFAAPQHGYTRQLLEAA 528



 Score =  178 bits (451), Expect = 5e-49
 Identities = 107/266 (40%), Positives = 159/266 (59%), Gaps = 13/266 (4%)

Query: 275 LLSVRDVRKTYGSFE----ALKGISFDLMPGETMAVVGESGSGKSTLARALLRL-----D 325
           L+ +RD+   + + +     +  +SFD+  GET+A+VGESGSGKS  A ++LRL      
Sbjct: 6   LIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPYPLA 65

Query: 326 EPDSGTALWKGRDLFALSPAELYKLRRD-LQMVFQDPTQSLNPRMTVYQLISEAWVIHPD 384
              SGT  + G+DL  L    +  +R + + M+FQ+P  SLNP  ++ + I+E   +H  
Sbjct: 66  RHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHKG 125

Query: 385 ILPKAKWRERVAELLVQVGLSAEH--MSRYPHQFSGGQRQRIAIARALALEPQLIICDEA 442
           +  K    +R  ELL  VG+   H  +   PH+ SGGQRQR+ IA ALA EP+L+I DE 
Sbjct: 126 LQGKVA-TQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEP 184

Query: 443 VSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVRE 502
            +ALDV+VQ +++ELL  L+  +G+A + I+HDL +VR  A  V VMQ+G +VE      
Sbjct: 185 TTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQADCET 244

Query: 503 VFDTPRQAYTRALLAASLSPDPDAKA 528
           +F +P+  YT+ LLAA  S  P + A
Sbjct: 245 LFQSPQHPYTQELLAAEPSGGPASNA 270