Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  423 bits (1087), Expect = e-123
 Identities = 245/532 (46%), Positives = 344/532 (64%), Gaps = 24/532 (4%)

Query: 4   HLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPP 63
           +L+E+R+LSV F         V+++S  +  GE LA++GESGSGKSV++ +I+ L+    
Sbjct: 2   NLIEIRDLSVAFSGQT----VVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLP-EA 56

Query: 64  GRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH- 122
           G  ++G I   G++L+   A   +++ G R+AMIFQ+P++ LNP++S+  QI E +  H 
Sbjct: 57  GTETTGSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHK 116

Query: 123 GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEP 182
           GL G  A+   L LL  VGI +P+  ++ YPH+ SGGQRQRVMIAMALA  P+LLIADEP
Sbjct: 117 GLGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEP 176

Query: 183 TTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVRE 242
           TTALDVTVQ ++L LLK LQ+  GM++L+I+HDL +V  IA RV VM  G IVE    + 
Sbjct: 177 TTALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQT 236

Query: 243 IYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDV------------RKTYGSFEA 290
           ++  PQHPY++ L+ A P   A+       E +L V D+            RKTY    A
Sbjct: 237 LFNAPQHPYSRLLLDAEPDADALCSD--ERETVLQVDDLTVQFRLGGGLFRRKTY--LRA 292

Query: 291 LKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKL 350
           + GIS  +  G+T+ +VGESGSGKSTL +A+LRL +  +G+  ++G  L  L+  ++   
Sbjct: 293 VDGISLSVQRGKTLGIVGESGSGKSTLGQAILRLLD-STGSIRFQGEALDPLNNQQMRPW 351

Query: 351 RRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMS 410
           R+ +Q+VFQDP  SL+PRMTV Q+ISE   +H      A    +V ++L  VGL      
Sbjct: 352 RKQMQVVFQDPYGSLSPRMTVEQIISEGLEVHAP-CSLADRDAQVIQVLKDVGLDPASRH 410

Query: 411 RYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFI 470
           RYPH+FSGGQRQRIAIARAL L+P L++ DE  SALD +VQ QV+ LL  L+ + G+ ++
Sbjct: 411 RYPHEFSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYL 470

Query: 471 FIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASLSP 522
           FI+HDL VVR  A  ++V++ G+VVE G    VFD P+  YT+ LLAA+  P
Sbjct: 471 FISHDLAVVRAMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELLAAAHIP 522



 Score =  191 bits (485), Expect = 6e-53
 Identities = 111/280 (39%), Positives = 170/280 (60%), Gaps = 12/280 (4%)

Query: 275 LLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTAL- 333
           L+ +RD+   +     ++ +S D+ PGE +A+VGESGSGKS  A ++L+L  P++GT   
Sbjct: 3   LIEIRDLSVAFSGQTVVRNLSLDVRPGECLALVGESGSGKSVTAHSILQL-LPEAGTETT 61

Query: 334 ----WKGRDLFALSPAELYKLRRD-LQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPK 388
               ++G++L   S A L KLR + + M+FQ+P  SLNP  ++ + I E  ++H  +  K
Sbjct: 62  GSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKGLGGK 121

Query: 389 AKWRERVAELLVQVGLSA--EHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSAL 446
           A  + R+ ELL  VG+    E +  YPHQ SGGQRQR+ IA ALA EP+L+I DE  +AL
Sbjct: 122 AA-QARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTTAL 180

Query: 447 DVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDT 506
           DV+VQ +++ LL  L++ +G++ + I+HDL +VR  A  V VM+ GE+VE    + +F+ 
Sbjct: 181 DVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTLFNA 240

Query: 507 PRQAYTRALLAASLSPDPDAKAGHLASVPAEAADILIPKR 546
           P+  Y+R LL A   PD DA          +  D+ +  R
Sbjct: 241 PQHPYSRLLLDA--EPDADALCSDERETVLQVDDLTVQFR 278