Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  474 bits (1219), Expect = e-138
 Identities = 265/561 (47%), Positives = 363/561 (64%), Gaps = 47/561 (8%)

Query: 2   AEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDM 61
           A  LL+VR L V F  + G V AV+ +   L +GETLA++GESG GKS ++ A++ L+  
Sbjct: 10  APPLLDVRGLDVFFLGSNGPVQAVRGLDLTLQRGETLALVGESGCGKSTTALALLRLL-- 67

Query: 62  PPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTT 121
            PG +  G I  DGRD+L +   + REV GR ++MIFQ+P++ LNPV+++G QI E +  
Sbjct: 68  APGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRR 127

Query: 122 HG-LAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIAD 180
           H  L+   AR+ A+ LL  V IPEP + +  +PH  SGGQRQRVMIAMA+A +P LL+AD
Sbjct: 128 HEKLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVAD 187

Query: 181 EPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTV 240
           EPTTALDVT+QA++L+LL  L+RE  MA+L+ITHDLG+V++ ADRV VM  G  VE  + 
Sbjct: 188 EPTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEAST 247

Query: 241 REIYKNPQHPYTQKLIAAAPGKG--------------------------AMHEPG----- 269
             ++  P H YT+ L+ A+   G                          A+H P      
Sbjct: 248 SRLFAAPSHAYTRGLLGASLHAGSALHYVDARLPEIQTRLDAATGERSFALHVPEPNSKV 307

Query: 270 -------ARAEPLLSVRDVRKTY-----GSFEALKGISFDLMPGETMAVVGESGSGKSTL 317
                  A AEPLLSV+D+R  Y     G   A+ G+SFD+  GET+ +VGESG GKSTL
Sbjct: 308 RALPVRTAAAEPLLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTL 367

Query: 318 ARALLRLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISE 377
           +R LLRL  P SG  ++ G D+  LS   L   RR +QMVFQDP  SLNPR +V+ +I  
Sbjct: 368 SRTLLRLVNPASGRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIES 427

Query: 378 AWVIHPDILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLI 437
              +H  +  +A+ R R+A +L +VGL A+   R+P++FSGGQRQRI IARAL L P L+
Sbjct: 428 VLKVH-GVADRAERRNRIAAILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRPSLV 486

Query: 438 ICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVEL 497
           + DE VSALDVSVQAQ++ LL  L+ + G++++FI+HDL VVR  AD VMVM +G++VE 
Sbjct: 487 VLDEPVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVET 546

Query: 498 GTVREVFDTPRQAYTRALLAA 518
           G+ R+++D P+  YTR+L+AA
Sbjct: 547 GSHRDIWDRPQHPYTRSLIAA 567



 Score =  221 bits (563), Expect = 6e-62
 Identities = 124/262 (47%), Positives = 174/262 (66%), Gaps = 10/262 (3%)

Query: 2   AEHLLEVRNLSVEF-HTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLID 60
           AE LL V++L  ++     GV+HAV  +S+ +  GET+ ++GESG GKS  S  ++ L++
Sbjct: 317 AEPLLSVQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLVN 376

Query: 61  MPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120
                 +SG I+ DG D+  + +E+  +   RRV M+FQDP + LNP  SV   I   + 
Sbjct: 377 P-----ASGRIVFDGTDIAQL-SEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLK 430

Query: 121 THGLAG-SKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179
            HG+A  ++ R     +L RVG+P    A R++P+EFSGGQRQR+ IA AL LRP L++ 
Sbjct: 431 VHGVADRAERRNRIAAILERVGLPAD--AGRRFPNEFSGGQRQRIGIARALVLRPSLVVL 488

Query: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239
           DEP +ALDV+VQA++L LL EL+ + G++ L I+HDL VV  IADRV+VM KG IVE G+
Sbjct: 489 DEPVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQIVETGS 548

Query: 240 VREIYKNPQHPYTQKLIAAAPG 261
            R+I+  PQHPYT+ LIAA PG
Sbjct: 549 HRDIWDRPQHPYTRSLIAAVPG 570



 Score =  202 bits (513), Expect = 4e-56
 Identities = 121/261 (46%), Positives = 165/261 (63%), Gaps = 11/261 (4%)

Query: 270 ARAEPLLSVRDVRKTY----GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLD 325
           A+A PLL VR +   +    G  +A++G+   L  GET+A+VGESG GKST A ALLRL 
Sbjct: 8   AKAPPLLDVRGLDVFFLGSNGPVQAVRGLDLTLQRGETLALVGESGCGKSTTALALLRLL 67

Query: 326 EPDS---GTALWKGRDLFALSPAELYKLR-RDLQMVFQDPTQSLNPRMTVYQLISEAWVI 381
            P +   G+  + GRD+ ALSPA+L ++R R++ M+FQ+P  SLNP  T+   I E    
Sbjct: 68  APGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRR 127

Query: 382 HPDILPKAKWRERVAELLVQVGLSAEH--MSRYPHQFSGGQRQRIAIARALALEPQLIIC 439
           H  +   A  R+R  ELL  V +   H  +  +PH  SGGQRQR+ IA A+A +P+L++ 
Sbjct: 128 HEKLSALAA-RKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVA 186

Query: 440 DEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGT 499
           DE  +ALDV++QAQ++ELLD LRRE+ +A + I HDL +V  +AD V VM  GE VE  +
Sbjct: 187 DEPTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEAS 246

Query: 500 VREVFDTPRQAYTRALLAASL 520
              +F  P  AYTR LL ASL
Sbjct: 247 TSRLFAAPSHAYTRGLLGASL 267