Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 545 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  429 bits (1102), Expect = e-124
 Identities = 244/532 (45%), Positives = 338/532 (63%), Gaps = 22/532 (4%)

Query: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           +LEVR L V   + A   HA+  +   ++ G TL I+GESGSGKSV ++ +M L+     
Sbjct: 10  ILEVRGLRVALPSDADRPHAIAQLDLRIEAGRTLCIVGESGSGKSVLATTVMGLLSKGLV 69

Query: 65  RISSGEILLDGRDLLT---MPAEER-REVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120
            +  G+++L G  L+      +++R R++ G  + M+FQ+P++ LNPV + G Q+ E + 
Sbjct: 70  -LEGGDVILSGEKLVDNGRFTSDKRLRQLRGTGMGMVFQEPMTALNPVLTCGEQVDELLR 128

Query: 121 THGLAGSKARE-EALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179
           TH   G+  R+   L +  RV +P+P R    YPH+ SGGQRQR++IAMA+ L+P LLI 
Sbjct: 129 THTAWGAAERKAHILSIFERVRLPDPARIHASYPHQLSGGQRQRIVIAMAIILKPRLLIC 188

Query: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239
           DEPTTALDVT QAE+LKL+ ELQ E G AVL ITHD+GVV+EIAD V+VM +GA+VE G 
Sbjct: 189 DEPTTALDVTTQAEILKLIAELQAEQGSAVLFITHDMGVVAEIADDVMVMHRGALVEQGP 248

Query: 240 VREIYKNPQHPYTQKLIAAAPG---KGAMHEPGARAEPLLSVRDVRKTYGSFE------- 289
             ++ ++P+  YT+ L+ A PG     A   PG R  PLL+ + V K Y   +       
Sbjct: 249 CDQVLRSPREAYTRMLLDAVPGMTPPPARELPGGR--PLLAGQGVGKIYTRRDWLGRAKH 306

Query: 290 --ALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAEL 347
             AL+  S  +  GET+ VVGESGSGKST AR ++RL  P +G+ LW   ++  L    L
Sbjct: 307 NTALQDASVAVHRGETVGVVGESGSGKSTFARCMIRLISPSAGSILWGDAEVRDLPEGRL 366

Query: 348 YKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAE 407
             LR  +Q+VFQDP +SLNPR TV   + E  +     L K   R+   EL+ ++ L   
Sbjct: 367 RPLRSRVQVVFQDPNRSLNPRRTVGSSMVEGAMNFG--LSKLHARQTAEELMDRIQLPRT 424

Query: 408 HMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGI 467
            + RYPHQFSGGQRQR+AIARA+A +PQ+++ DEAVSALDVSVQAQ+++LL  ++R++G+
Sbjct: 425 ALDRYPHQFSGGQRQRLAIARAIACQPQVLVADEAVSALDVSVQAQILDLLREIQRDLGL 484

Query: 468 AFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAAS 519
             +FI HDL V     D V+VM QG +VE G   +VF  P   YTR LLAA+
Sbjct: 485 GILFITHDLRVAAQLCDRVIVMSQGRIVEQGPTGQVFAAPANDYTRRLLAAA 536



 Score =  189 bits (479), Expect = 3e-52
 Identities = 101/237 (42%), Positives = 154/237 (64%), Gaps = 8/237 (3%)

Query: 24  AVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPGRISSGEILLDGRDLLTMPA 83
           A++  S  + +GET+ ++GESGSGKS  +  ++ LI       S+G IL    ++  +P 
Sbjct: 309 ALQDASVAVHRGETVGVVGESGSGKSTFARCMIRLISP-----SAGSILWGDAEVRDLPE 363

Query: 84  EERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHGLAGSKAREEALRLLRRVGIP 143
              R +  R V ++FQDP   LNP  +VG  + E     GL+   AR+ A  L+ R+ +P
Sbjct: 364 GRLRPLRSR-VQVVFQDPNRSLNPRRTVGSSMVEGAMNFGLSKLHARQTAEELMDRIQLP 422

Query: 144 EPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLKLLKELQR 203
               A+ +YPH+FSGGQRQR+ IA A+A +P +L+ADE  +ALDV+VQA++L LL+E+QR
Sbjct: 423 RT--ALDRYPHQFSGGQRQRLAIARAIACQPQVLVADEAVSALDVSVQAQILDLLREIQR 480

Query: 204 ETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREIYKNPQHPYTQKLIAAAP 260
           + G+ +L ITHDL V +++ DRV+VM +G IVE G   +++  P + YT++L+AAAP
Sbjct: 481 DLGLGILFITHDLRVAAQLCDRVIVMSQGRIVEQGPTGQVFAAPANDYTRRLLAAAP 537