Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  410 bits (1054), Expect = e-119
 Identities = 234/526 (44%), Positives = 330/526 (62%), Gaps = 18/526 (3%)

Query: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           LL+V  L++       +VH    IS+ +  GE + I+GESGSGK++++ +++ L   P  
Sbjct: 9   LLQVSGLTLALADGKALVHG---ISFDIAPGEMIGIVGESGSGKTLAARSLIGLAP-PAV 64

Query: 65  RISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHG- 123
             ++G I+ DG+++  + A   R++ G R+ M+FQ+P++ LNP  ++G Q+ E +  H  
Sbjct: 65  HRTAGSIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTT 124

Query: 124 LAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPT 183
           L+ ++ R   L +L RV I +P  A+  YPH FSGG RQR+M+A A+ LRP LLIADEPT
Sbjct: 125 LSPAQRRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPT 184

Query: 184 TALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREI 243
           TALD  VQ EV+ L+ EL R+ G AVL+I+HDL +V+   DR+VVM  G IVE+     +
Sbjct: 185 TALDAVVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAAL 244

Query: 244 YKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDVRKTYGS----------FEALKG 293
              P+  YT+KL+AA P +G + E   +A P+L V  +   + +            ALKG
Sbjct: 245 VSAPREDYTRKLLAAMPTRGPVREI-PQAAPILEVDGLVLDFPAGGGLLSKRPPKRALKG 303

Query: 294 ISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLRRD 353
           I   + PGE +A+VG SGSGK+TL RA+  L +P  G  L++G+ +   S     + R  
Sbjct: 304 IDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIARRSEG-WARYRAQ 362

Query: 354 LQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSRYP 413
            QMVFQDP  SL+PRMTV   I EA    P + P A+ R R+ E+L +V L AE  SRYP
Sbjct: 363 CQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAAR-RGRILEVLQEVSLPAEVASRYP 421

Query: 414 HQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIA 473
           H+ SGGQRQR+AIARA+   P  I+ DE VSALDV+V+AQ++EL  +L+   G + +FI+
Sbjct: 422 HELSGGQRQRVAIARAVVRRPAFIVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFIS 481

Query: 474 HDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAAS 519
           HDL VV   AD V+VM+ GE+VE G   EVFD P   YTR LLAA+
Sbjct: 482 HDLAVVEQIADRVIVMRHGEIVEQGPRDEVFDRPHHDYTRELLAAA 527



 Score =  186 bits (473), Expect = 2e-51
 Identities = 112/271 (41%), Positives = 156/271 (57%), Gaps = 16/271 (5%)

Query: 2   AEHLLEVRNLSVEFHTAAGVV------HAVKSISYHLDKGETLAILGESGSGKSVSSSAI 55
           A  +LEV  L ++F    G++       A+K I   +  GE +A++G SGSGK+    AI
Sbjct: 272 AAPILEVDGLVLDFPAGGGLLSKRPPKRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAI 331

Query: 56  MNLIDMPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQI 115
             L+       S G IL +G+ +        R     +  M+FQDP S L+P  +VG  I
Sbjct: 332 AGLLQP-----SGGRILFEGKGIARRSEGWARY--RAQCQMVFQDPASSLDPRMTVGASI 384

Query: 116 SEAMT-THGLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRP 174
            EA+T   GL  +  R   L +L+ V +P       +YPHE SGGQRQRV IA A+  RP
Sbjct: 385 GEALTGMPGLTPAARRGRILEVLQEVSLPA--EVASRYPHELSGGQRQRVAIARAVVRRP 442

Query: 175 DLLIADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAI 234
             ++ADEP +ALDVTV+A++L+L  +LQ   G + L I+HDL VV +IADRV+VM  G I
Sbjct: 443 AFIVADEPVSALDVTVRAQILELFAQLQSRHGFSCLFISHDLAVVEQIADRVIVMRHGEI 502

Query: 235 VEAGTVREIYKNPQHPYTQKLIAAAPGKGAM 265
           VE G   E++  P H YT++L+AAAP  G +
Sbjct: 503 VEQGPRDEVFDRPHHDYTRELLAAAPRMGGL 533



 Score =  182 bits (463), Expect = 2e-50
 Identities = 103/239 (43%), Positives = 149/239 (62%), Gaps = 8/239 (3%)

Query: 293 GISFDLMPGETMAVVGESGSGKSTLARALLRLDEP----DSGTALWKGRDLFALSPAELY 348
           GISFD+ PGE + +VGESGSGK+  AR+L+ L  P     +G+ ++ G+++ ALS   L 
Sbjct: 28  GISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPAVHRTAGSIVFDGQEVTALSAGALR 87

Query: 349 KLRRD-LQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLS-- 405
           KLR   + MVFQ+P  SLNP M + + + E   +H  + P A+ R R+ E+L +V +   
Sbjct: 88  KLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTTLSP-AQRRARILEMLERVRIQDP 146

Query: 406 AEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREM 465
           A  +S YPH+FSGG RQRI +A A+ L P L+I DE  +ALD  VQ +V++L+  L R+ 
Sbjct: 147 AAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPTTALDAVVQREVMDLMVELTRDH 206

Query: 466 GIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASLSPDP 524
           G A + I+HDLP+V  + D ++VM  G +VE      +   PR+ YTR LLAA  +  P
Sbjct: 207 GTAVLMISHDLPMVARYTDRMVVMHHGRIVESNRTAALVSAPREDYTRKLLAAMPTRGP 265