Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  436 bits (1120), Expect = e-126
 Identities = 251/539 (46%), Positives = 342/539 (63%), Gaps = 29/539 (5%)

Query: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPP- 63
           L++V+ L V F    G    V  I + +  GE LA++GESGSGK+V++ +++ L+     
Sbjct: 12  LIDVKGLRVAF----GGKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADV 67

Query: 64  ---GRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120
               R+   E     RDLL++P  E R + G+ +AMIFQ+P++ LN +YSVG QI+E + 
Sbjct: 68  TGEARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEVLE 127

Query: 121 TH-GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179
            H  L+   A+  A++LL   GIPEP R  R +PH+ SGGQRQR MIAMALA +P LL+A
Sbjct: 128 LHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLLLA 187

Query: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239
           DEPTTALDVTV+A++L LL +LQ + GMAVL+ITHDL +V   ADRVVVME G +VE G 
Sbjct: 188 DEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEHGA 247

Query: 240 VREIYKNPQHPYTQKLIAAAPGKG-AMHEPGARAEPLLSVRDVRKTY------------- 285
           V  ++  PQHPYT+KLI + P +  A  +    A P+L  + +R  Y             
Sbjct: 248 VAPVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVIYPVPKPGIGGWFRK 307

Query: 286 GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPA 345
           G F A++G  F ++PGET+ VVGESGSGKSTLA A L L +   G     G+D +A+  A
Sbjct: 308 GEFVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLK-HQGALKIAGKD-WAVDRA 365

Query: 346 ELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLS 405
               LRR +Q+VFQDP  SL+PRMTV Q++ E   +H   L     R R    L  VGL+
Sbjct: 366 SDLGLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSLAALADVGLT 425

Query: 406 AEH----MSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRL 461
                  + RYPH+FSGGQRQR+AIARAL ++PQL++ DE  SALDV++Q QV+ LL RL
Sbjct: 426 ESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLLQRL 485

Query: 462 RREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASL 520
           +RE G++++ I HD+ V+R  A  V+VM+ G ++E G V  V   P   YT+ L+AA+L
Sbjct: 486 QRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVLGAPEHPYTKKLVAAAL 544



 Score =  184 bits (468), Expect = 6e-51
 Identities = 115/287 (40%), Positives = 170/287 (59%), Gaps = 16/287 (5%)

Query: 273 EPLLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRL--DEPDSG 330
           +PL+ V+ +R  +G  E + GI F +  GE +A+VGESGSGK+  A +LLRL  +   +G
Sbjct: 10  QPLIDVKGLRVAFGGKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADVTG 69

Query: 331 TALWKG-------RDLFALSPAELYKLR-RDLQMVFQDPTQSLNPRMTVYQLISEAWVIH 382
            A   G       RDL ++   EL  +R +++ M+FQ+P  +LN   +V   I+E   +H
Sbjct: 70  EARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEVLELH 129

Query: 383 PDILPKAKWRERVAELLVQVGLS--AEHMSRYPHQFSGGQRQRIAIARALALEPQLIICD 440
             +  +A     V +LL   G+   A     +PHQ SGGQRQR  IA ALA +P+L++ D
Sbjct: 130 EALSARAAQAAAV-QLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLLLAD 188

Query: 441 EAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTV 500
           E  +ALDV+V+AQ+++LL  L+ + G+A + I HDL +VR FAD V+VM+ G VVE G V
Sbjct: 189 EPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEHGAV 248

Query: 501 REVFDTPRQAYTRALLAASLSPDPDAKAGHLASVP---AEAADILIP 544
             VFD P+  YTR L+ +  + D  A     A+VP   A+A  ++ P
Sbjct: 249 APVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVIYP 295