Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  460 bits (1183), Expect = e-134
 Identities = 253/528 (47%), Positives = 350/528 (66%), Gaps = 14/528 (2%)

Query: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           +++ R ++V F    G V AVK +S+ L +GET+AI+GESGSGKSV++  +M L+     
Sbjct: 25  VIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRAT 84

Query: 65  RISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHGL 124
                 I  DGRD+L     ERR + G R++MIFQ+P+S LNPVY++G QI EA+  H  
Sbjct: 85  IAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRR 144

Query: 125 AGSKAR-EEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEPT 183
              +A  E AL LLR V IP+PE  + +YPH+ SGGQRQRVMIAMALA  PD+LIADEPT
Sbjct: 145 VSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPT 204

Query: 184 TALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVREI 243
           TALDVTVQA++L L+++LQ+E GMAV++ITHDL VV + +D V VM+ G + E  T   +
Sbjct: 205 TALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEAL 264

Query: 244 YKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDVRKTY----GSF--------EAL 291
           + +PQH YT++L+++ P   A   P   A  LL  R+VR ++    G F         A+
Sbjct: 265 FADPQHAYTRRLLSSEPSGSANPLPD-DAPILLDGRNVRVSFTLKKGGFFRPEFKELVAV 323

Query: 292 KGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLR 351
            G+S +L   ET+ +VGESGSGK+T  +AL+RL   D G   ++G  +       +  LR
Sbjct: 324 DGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLR 383

Query: 352 RDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSR 411
             +Q+VFQDP  SLNPRM+V Q+I E  +++     +    +RV + LV  G+ +  +SR
Sbjct: 384 SKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNILSR 443

Query: 412 YPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIF 471
           +PH+FSGGQRQRIAIARA+ALEP+ I+ DE  SALD+SVQAQ+IELL RL+ E G++++ 
Sbjct: 444 FPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLV 503

Query: 472 IAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAAS 519
           I+HDL VVR     V+VMQ G++VE G V EV + P+ AYT  L+ A+
Sbjct: 504 ISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKAA 551



 Score =  195 bits (495), Expect = 4e-54
 Identities = 120/268 (44%), Positives = 165/268 (61%), Gaps = 17/268 (6%)

Query: 274 PLLSVRDVRKTY----GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDS 329
           P++  R V  ++    G+ +A+K +SF L  GET+A+VGESGSGKS  AR ++ L    +
Sbjct: 24  PVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRA 83

Query: 330 GTAL-----WKGRDLFALSPAELYKLRRD-LQMVFQDPTQSLNPRMTVYQLISEAWVIHP 383
             A      + GRD+   S  E   LR D + M+FQ+P  SLNP  T+   I EA   H 
Sbjct: 84  TIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHR 143

Query: 384 DILPKAKWRERVAELL--VQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDE 441
            +  +A   ER  ELL  VQ+      +++YPHQ SGGQRQR+ IA ALA +P ++I DE
Sbjct: 144 RVSRRAA-AERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADE 202

Query: 442 AVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVR 501
             +ALDV+VQAQ++ L+ +L++E+G+A I I HDL VVR F+DYV VMQ GEV E  T  
Sbjct: 203 PTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTE 262

Query: 502 EVFDTPRQAYTRALLAA----SLSPDPD 525
            +F  P+ AYTR LL++    S +P PD
Sbjct: 263 ALFADPQHAYTRRLLSSEPSGSANPLPD 290