Pairwise Alignments

Query, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 623 a.a., Dipeptide transport ATP-binding protein DppD in protein degradation cluster from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  479 bits (1234), Expect = e-139
 Identities = 276/562 (49%), Positives = 364/562 (64%), Gaps = 43/562 (7%)

Query: 5   LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
           +L V  L++ FH     V AV+++S  L +GETLAI+GESGSGKSV++ A+M LI+    
Sbjct: 12  VLSVSGLNIAFHHEGQQVDAVRNVSLRLKRGETLAIVGESGSGKSVTALALMRLIEQSGA 71

Query: 65  RISSGEILLDGRDLLTMPAEER-----REVNGRRVAMIFQDPLSHLNPVYSVGWQISEAM 119
            +  GE+LL  R+   +   E+     R V G  +AMIFQ+P++ LNPV++VG QI+E++
Sbjct: 72  NVRCGEMLLRRRNRQVIELSEQSDAQMRRVRGADIAMIFQEPMTSLNPVFTVGEQIAESI 131

Query: 120 TTH-GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLI 178
             H G +  +A  EA R+L +V IPE +  + +YPH+ SGG RQRVMIAMAL+ RP +LI
Sbjct: 132 RLHQGASHEEALAEAKRMLDQVRIPESQAILSRYPHQLSGGMRQRVMIAMALSCRPAVLI 191

Query: 179 ADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAG 238
           ADEPTTALDVT+QA++L+L+K LQ+E  M V+ ITHD+GVV++IADRV+VM +G  VE G
Sbjct: 192 ADEPTTALDVTIQAQILQLIKVLQQEMSMGVIFITHDMGVVADIADRVLVMYQGEAVETG 251

Query: 239 TVREIYKNPQHPYTQKLIAAAPGKGAMH--------------EPG-----------ARAE 273
           +V +I+  P HPYTQ L+AA P  GAM               EP               E
Sbjct: 252 SVEQIFHAPTHPYTQTLLAAVPQLGAMRGHSLPRRFPLISADEPALYESQIEQDTVVEGE 311

Query: 274 PLLSVRDV-----------RKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARALL 322
           P+L VR +            +      A++ ISFDL PGET+++VGESGSGKST  RALL
Sbjct: 312 PILQVRGLVTRFPLRSGLFNRVTREVHAVENISFDLWPGETLSLVGESGSGKSTTGRALL 371

Query: 323 RLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIH 382
           RL E   G  ++ G+ +  LS  +L  LRRD+Q +FQDP  SL+PR TV   I E   IH
Sbjct: 372 RLVESRQGEIIFNGQRIDTLSAGKLQPLRRDIQCIFQDPYASLDPRQTVGYSIMEPLRIH 431

Query: 383 PDILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEA 442
             +       +RVA LL +VGL  EH  RYPH+FSGGQRQRI IARALAL P++II DEA
Sbjct: 432 -GLGQGDAAAKRVAWLLERVGLRPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEA 490

Query: 443 VSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVRE 502
           VSALDVSV+ Q+I LL  L+REMGIA++FI+HD+ VV   +  V VM  G++VE+G  R 
Sbjct: 491 VSALDVSVRGQIINLLLDLQREMGIAYLFISHDMAVVERISHRVAVMYLGQIVEMGPRRA 550

Query: 503 VFDTPRQAYTRALLAASLSPDP 524
           VF+ P+  YTR L+AA    DP
Sbjct: 551 VFENPQHPYTRKLMAAVPVADP 572