Pairwise Alignments

Query, 365 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 355 a.a., Nucleoside ABC transporter, permease protein 1 from Variovorax sp. SCN45

 Score =  210 bits (535), Expect = 4e-59
 Identities = 116/326 (35%), Positives = 192/326 (58%), Gaps = 5/326 (1%)

Query: 31  IIQPAAAVVLALACGAALLAFNGYEARAVIDVMVLGVFQDTRSIAEILLKATPLILIGVG 90
           ++ P  AVV  +   A L+ + G        +++ G F    + +E L +A PLIL G+ 
Sbjct: 16  VLAPIGAVVFTMIVSALLVLWAGAPVGRTYALLLQGGFGSVFAWSETLTRAIPLILTGLA 75

Query: 91  LCVAFRCSIWNIGAEGQFYAGAIAATAAGVSFDG----LTAWIYVPLVMIAGALAGAAWA 146
             VAF+  ++NIG+EGQ YAGA+AA A G    G    L+ W+  PL+M+A A+AGA   
Sbjct: 76  ATVAFKARLFNIGSEGQLYAGALAAVAVGGMHGGTGFELSPWLLFPLMMLAAAVAGALML 135

Query: 147 AIAGLLKVYFRASEIVTTIMLNYIAIIMTSYLVTGPLRDAAA-AYPQSARLVQEAWMPRI 205
               L+K      E+VTT+++N+I ++  S L+ GP++D  A  +PQS  L  +  + ++
Sbjct: 136 LGPALMKNKLGVDEVVTTLLINFIVLLGVSALLDGPMKDPTAMGWPQSVSLQSDLELGKL 195

Query: 206 LPPTRLHIGILVALALAVVMYIFLFRSTRGYALRVVGISPDAARYAGISVPRNIMLSICL 265
           +  TR+H G+L A++LAV+++     +  G+ +R VG +  AA +AG+ V R +++   L
Sbjct: 196 VAQTRVHTGLLWAVSLAVMVWAVFKYTVLGFDIRAVGANARAAAFAGVPVTRTVVMVALL 255

Query: 266 SGSMAGLAGAFEIAGVTRRLFQSISPGYGFEGIAVALLANNNPIGAVFSGLLFAILRSGS 325
           SG++AGLAGA E+AG T  +   +SPGYG+ GI +A+LA  +P+G + +G+  A +  G+
Sbjct: 256 SGALAGLAGAIEVAGRTSYVTLDMSPGYGYTGIVIAMLAGLHPLGVIAAGVFVAGVLVGA 315

Query: 326 ELMQITAQVPQVLVLVIQGIVILSVV 351
           + M     VP  +  VI    +++V+
Sbjct: 316 DTMSRAVGVPTYIADVIVAASLIAVL 341