Pairwise Alignments

Query, 365 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 367 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

 Score =  175 bits (443), Expect = 2e-48
 Identities = 100/327 (30%), Positives = 171/327 (52%), Gaps = 12/327 (3%)

Query: 34  PAAAVVLALACGAALLAFNGYEARAVIDVMVLGVFQDTRSIAEILLKATPLILIGVGLCV 93
           P   VV A      ++   G    A + +++ G      +I   L   T  I  G+ + V
Sbjct: 18  PLLNVVTAFLISGLVVWSIGENPLAALRLLIEGALGRGDAIGFTLFYTTSFIFTGLSVAV 77

Query: 94  AFRCSIWNIGAEGQFYAGAIAATAAGVSFDGLTAW-IYVPLVMIAGALAGAAWAAIAGLL 152
           AF   ++NIG+EGQ Y G + A    ++ D    W + +P  +I  A+ GAAWA I   L
Sbjct: 78  AFHAGLFNIGSEGQAYVGGLGAALVALALDRYVPWYVTMPFAVIGAAVFGAAWAFIPAWL 137

Query: 153 KVYFRASEIVTTIMLNYIAIIMTSYLVTGPLRDAAAAYPQSARLVQEAWMPRI------- 205
           +    +  ++TTIM N+IA  +  YL+   L       P++   +    +P++       
Sbjct: 138 QAKRGSHVVITTIMFNFIAAALMVYLLVNVLIVPGKMAPETRTFLPGGQLPKLDWLMAWF 197

Query: 206 ---LPPTRLHIGILVALALAVVMYIFLFRSTRGYALRVVGISPDAARYAGISVPRNIMLS 262
              L P   ++  L+AL +  ++++ ++R+  GY +R +G+SP AA YAGI   R ++++
Sbjct: 198 GLKLGPAPFNVSFLIALVMCFLVWVLIWRTKLGYEMRTLGVSPSAAIYAGIPYSRTVIIA 257

Query: 263 ICLSGSMAGLAGAFEIAGVTRRLFQSISPGYGFEGIAVALLANNNPIGAVFSGLLFAIL- 321
           + +SG +AG+     + G + RL      G GF GIAV+L+  ++P+G +FS LLF IL 
Sbjct: 258 MLISGGLAGMMALNPVMGASARLQVEFVGGAGFVGIAVSLMGRSHPLGIIFSALLFGILY 317

Query: 322 RSGSELMQITAQVPQVLVLVIQGIVIL 348
           + G++L      + + +++VIQG+VIL
Sbjct: 318 QGGADLSFEMPNITREMIVVIQGLVIL 344