Pairwise Alignments

Query, 508 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 507 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  287 bits (735), Expect = 5e-82
 Identities = 190/499 (38%), Positives = 273/499 (54%), Gaps = 12/499 (2%)

Query: 6   LLLMDGIHKRFGPLIVSAGVTLDVEENEIHALLGENGAGKTVLMSILCGVLSPNEGQIVF 65
           LL + GI KRFG      GV   +   EIHAL GENGAGK+ LM+I+ G+  P+EG+   
Sbjct: 7   LLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGIHQPDEGETSL 66

Query: 66  KGRPLKLGSPREAIKHRIGMVHQHFMLVPNLTVAENYVLGQ-GSPFSMIRDMRAVHARIL 124
            GR + +  P  A++  IG+VHQ   L  + TVAEN  + +  +      +  +++ R  
Sbjct: 67  DGRKVVIDGPAHAMRLGIGLVHQEIALCGDATVAENIFMPEINAGKHAWMNYASLNERAA 126

Query: 125 ELSDRYGLDVAPDALVSSLSVGERQRVEILKVLYHGIELLILDEPTAVLTPQETDRLLHL 184
            +  R G DV P ALV  LS+  +Q +EI K L    ++LILDEPTA LT  E+  L  +
Sbjct: 127 RVLQRLGQDVDPAALVKDLSISTQQLIEIAKALTLDCKVLILDEPTAALTDNESAALFKV 186

Query: 185 LRQLVADGKTVIFISHKLDEVMRVSDRVSVMRDAKVVRTVKTSETTARELARMMVGRDVL 244
           L  L A G  +I+ISH++ E+     RV+V+RD + V     +E  A  L R MVGRD+ 
Sbjct: 187 LHDLKAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNVHCGPLAELDADALVRRMVGRDLG 246

Query: 245 MYLP--RAPLEPGRVVLSVEHLSCDGEAGLPALRDVSFEVRANEIVGIAGVSGNGQSELA 302
            Y P        G  VL V  ++ DGE     +  VSF +R  EI+GIAG+ G G+SELA
Sbjct: 247 NYYPPKHGDAAHGEPVLEVSDIA-DGE----RVHGVSFTLRRGEILGIAGLMGAGRSELA 301

Query: 303 LALTGLLPVASGSVTLDGTQLAGLSSYEINQLPMAHIPEDRHRMGIVLPLPLTENVILQR 362
             + GL     G+V L G  LA     +  +  +A++ EDR   G+ L LP+ +N+    
Sbjct: 302 ETVCGLRTATRGAVRLRGRTLAIRKYSDALREGIAYLSEDRKAAGVYLDLPIAQNIASMA 361

Query: 363 FDKPPFSSR-GLLDLNEITRQTRDLMRRFKVKASGPGDRIRNLSGGNQQKLVVGRELDRR 421
             +   SSR GLL      +   DL  + K+K+ G    + +LSGGNQQK+ + + L   
Sbjct: 362 LRR--VSSRFGLLQRAAERKLALDLGGKLKLKSDGVDIDVASLSGGNQQKVAIAKLLATN 419

Query: 422 FDFLLINQLTRGIDIGATELVMHKILEQRSAGKAILLISTELEELFTLSDRILVMYEGRL 481
              LL+++ TRG+D+GA   + H + E  S G  +++IS+EL E+  L DR LV+ +GRL
Sbjct: 420 PSVLLMDEPTRGVDVGAKSEIHHILRELASQGVGVVVISSELPEIIGLCDRALVIRDGRL 479

Query: 482 VGEIPPDRSRLEEIGLLMA 500
            GE+  D    EE  L +A
Sbjct: 480 AGEV-QDNEMTEEALLRLA 497



 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 11/226 (4%)

Query: 24  GVTLDVEENEIHALLGENGAGKTVLMSILCGVLSPNEGQIVFKGRPLKLGSPREAIKHRI 83
           GV+  +   EI  + G  GAG++ L   +CG+ +   G +  +GR L +    +A++  I
Sbjct: 276 GVSFTLRRGEILGIAGLMGAGRSELAETVCGLRTATRGAVRLRGRTLAIRKYSDALREGI 335

Query: 84  GMVHQHFMLVP---NLTVAENY----VLGQGSPFSMIRDMRAVHARI-LELSDRYGLDV- 134
             + +         +L +A+N     +    S F +++  RA   ++ L+L  +  L   
Sbjct: 336 AYLSEDRKAAGVYLDLPIAQNIASMALRRVSSRFGLLQ--RAAERKLALDLGGKLKLKSD 393

Query: 135 APDALVSSLSVGERQRVEILKVLYHGIELLILDEPTAVLTPQETDRLLHLLRQLVADGKT 194
             D  V+SLS G +Q+V I K+L     +L++DEPT  +       + H+LR+L + G  
Sbjct: 394 GVDIDVASLSGGNQQKVAIAKLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQGVG 453

Query: 195 VIFISHKLDEVMRVSDRVSVMRDAKVVRTVKTSETTARELARMMVG 240
           V+ IS +L E++ + DR  V+RD ++   V+ +E T   L R+  G
Sbjct: 454 VVVISSELPEIIGLCDRALVIRDGRLAGEVQDNEMTEEALLRLASG 499