Pairwise Alignments

Query, 508 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 492 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  292 bits (747), Expect = 2e-83
 Identities = 180/485 (37%), Positives = 275/485 (56%), Gaps = 8/485 (1%)

Query: 6   LLLMDGIHKRFGPLIVSAGVTLDVEENEIHALLGENGAGKTVLMSILCGVLSPNEGQIVF 65
           +L + GI KR+GPL V   V L+V   E+ ALLGENGAGK+ L  I+ G   P+EG++ +
Sbjct: 5   VLSLRGISKRYGPLEVLKSVDLEVYPGEVVALLGENGAGKSTLSGIIAGSREPSEGKMTW 64

Query: 66  KGRPLKLGSPREAIKHRIGMVHQHFMLVPNLTVAENYVLGQGSPFSMIRDMRAVHARILE 125
            G+P +  SPREAI   I ++HQ   L+P L++AEN  +G+    + I D   +  R  +
Sbjct: 65  LGQPYQPASPREAIDKGIVLIHQELKLLPELSIAENVFIGRWPMKNGIVDRAEMVRRAQQ 124

Query: 126 LSDRYGLDVAPDALVSSLSVGERQRVEILKVLYHGIELLILDEPTAVLTPQETDRLLHLL 185
              R  L +     V+ LS   +Q +EI K L    +LLILDEPTA L   ET  L   +
Sbjct: 125 QLARLNLHIPATRKVAGLSTANQQLIEIAKALALDAKLLILDEPTAALGGAETQALFEQV 184

Query: 186 RQLVADGKTVIFISHKLDEVMRVSDRVSVMRDAKVVRTVKTSETTARELARMMVGRDVLM 245
           R+L A+G  +I+ISH+++E+ +++DR+ V+RD + V     S T  R +   MVGR +  
Sbjct: 185 RKLRAEGVGIIYISHRMEEIRQITDRIVVLRDGERVHEFADSATPVRTIVESMVGRSLER 244

Query: 246 YLPRAPLEPGRVVLSVEHLSCDGEAGLPALRDVSFEVRANEIVGIAGVSGNGQSELALAL 305
             P  P    +VVL V+ L+        A RD+SF VRA EI+GIAG+ G G++EL  A+
Sbjct: 245 LFPALPEPQEKVVLEVKGLT----GATNAFRDISFGVRAGEILGIAGLIGAGRTELVRAI 300

Query: 306 TGLLPVASGSVTLDGTQLAGLSSYEINQLPMAHIPEDRHRMGIVLPLPLTENVILQRFDK 365
           +G  P ++G V LDG  L+  S  +     +  +PEDR   G+V+   + EN+I    D+
Sbjct: 301 SGADPTSAGEVRLDGEVLSLKSPADAIAKGIVMVPEDRKLQGLVVEHEIGENLIYANLDR 360

Query: 366 PPFSSRGLLDLNEITRQTRDLMRRFKVKASGPGDRIRNLSGGNQQKLVVGRELDRRFDFL 425
                 G +        TRD + +F VK         +LSGGNQQK+V+ + L R    +
Sbjct: 361 ---VGTGWITPAIKRAFTRDAIAKFGVKGRSE-QPASDLSGGNQQKVVIAKWLARNPRVV 416

Query: 426 LINQLTRGIDIGATELVMHKILEQRSAGKAILLISTELEELFTLSDRILVMYEGRLVGEI 485
           ++++ TRGID+GA   +   I+     G A++++S++LEE+  +S+RILV+ +G+  G +
Sbjct: 417 VLDEPTRGIDVGARAGIYDIIVGLAKDGVAVIVVSSDLEEVLGVSNRILVLAQGKQAGIL 476

Query: 486 PPDRS 490
             D +
Sbjct: 477 NRDEA 481



 Score = 73.6 bits (179), Expect = 2e-17
 Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 8/232 (3%)

Query: 272 LPALRDVSFEVRANEIVGIAGVSGNGQSELALALTGLLPVASGSVTLDGTQLAGLSSYEI 331
           L  L+ V  EV   E+V + G +G G+S L+  + G    + G +T  G      S  E 
Sbjct: 18  LEVLKSVDLEVYPGEVVALLGENGAGKSTLSGIIAGSREPSEGKMTWLGQPYQPASPREA 77

Query: 332 NQLPMAHIPEDRHRMGIVLPLPLTENVILQRFDKPPFSSRGLLDLNEITRQTRDLMRRFK 391
               +  I ++   + ++  L + ENV + R+        G++D  E+ R+ +  + R  
Sbjct: 78  IDKGIVLIHQE---LKLLPELSIAENVFIGRWPM----KNGIVDRAEMVRRAQQQLARLN 130

Query: 392 VKASGPGDRIRNLSGGNQQKLVVGRELDRRFDFLLINQLTRGIDIGATELVMHKILEQRS 451
           +       ++  LS  NQQ + + + L      L++++ T  +    T+ +  ++ + R+
Sbjct: 131 LHIPATR-KVAGLSTANQQLIEIAKALALDAKLLILDEPTAALGGAETQALFEQVRKLRA 189

Query: 452 AGKAILLISTELEELFTLSDRILVMYEGRLVGEIPPDRSRLEEIGLLMAGKS 503
            G  I+ IS  +EE+  ++DRI+V+ +G  V E     + +  I   M G+S
Sbjct: 190 EGVGIIYISHRMEEIRQITDRIVVLRDGERVHEFADSATPVRTIVESMVGRS 241