Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  461 bits (1187), Expect = e-134
 Identities = 248/535 (46%), Positives = 354/535 (66%), Gaps = 10/535 (1%)

Query: 1   MTGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60
           M   +L+E++DL+V+F++     R  + VSF +  GET+ ++GESGSGKSV+A +I+ L+
Sbjct: 1   MNQDNLIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLL 60

Query: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120
             P     +G++ Y G+DL +L E   R + G RIAMIFQ+P++ LNP+++I  Q+ EV 
Sbjct: 61  PYPLARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVL 120

Query: 121 TVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180
            +H    G  A QR +E+L  VGIPEP KR+   PH+ SGGQRQR+MI MA+A  PE+LI
Sbjct: 121 GLHKGLQGKVATQRTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240
           ADEPTTALDV+VQ +ILELLK+LQA  G+A+++I+HDL +   +A RV VM+ G IVE+ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQA 240

Query: 241 EARAVFENPAHSYTRTLINALPHADDRAPPRPARPA-GKPILEVKNIDKFYTLSSGFFAK 299
           +   +F++P H YT+ L+ A P         PA  A G P+LEV N+  ++ +  GF   
Sbjct: 241 DCETLFQSPQHPYTQELLAAEPSGG------PASNAIGPPLLEVDNLKVWFPIKKGFLRN 294

Query: 300 PA-RLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMD 358
               + AV  ++F +  G+T+GIVGESGSGKST+   +L L  + GG   F G+ +  + 
Sbjct: 295 TVDYVKAVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIASKGG-IRFEGQQLDTLS 353

Query: 359 RKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVG 418
           ++Q+   RR++Q+VFQDP+ S++PRM V +IV E  RIHK +         +   L  VG
Sbjct: 354 QQQVRPLRREMQVVFQDPFGSLSPRMCVSEIVGEGLRIHK-MGTPAEQEAAIIAALKEVG 412

Query: 419 LNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRD 478
           L+PE   RYPH+FSGGQRQRIAIARAL   P L++ DE  SALD +VQ QV++LL  L+ 
Sbjct: 413 LDPESRHRYPHEFSGGQRQRIAIARALVLKPRLILLDEPTSALDRTVQRQVVELLRSLQT 472

Query: 479 RLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533
           +  L Y+FI+HDL +V+  + +++V+K G++VE     EIF  PQH YTRQL+ A
Sbjct: 473 KYNLTYLFISHDLAVVKALSHQLMVVKHGQVVEQGDAAEIFAAPQHGYTRQLLEA 527



 Score =  191 bits (486), Expect = 5e-53
 Identities = 109/259 (42%), Positives = 159/259 (61%), Gaps = 9/259 (3%)

Query: 285 NIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGL----- 339
           N+ +   LS  F         V N+SFD+  GETI +VGESGSGKS  A  +L L     
Sbjct: 5   NLIEIRDLSVEFVTGDHHHRVVNNVSFDIKRGETIALVGESGSGKSVTAHSILRLLPYPL 64

Query: 340 NEASGGEALFHGRDVLKMDRKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHK 398
                G   + G+D+L +  K +   R  ++ M+FQ+P +S+NP  ++   ++E   +HK
Sbjct: 65  ARHPSGTINYAGQDLLTLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGLHK 124

Query: 399 DILEKTRWRDRVTELLGLVGLNPEHA--KRYPHQFSGGQRQRIAIARALACDPELVVCDE 456
            +  K   + R  ELL LVG+   H   K  PH+ SGGQRQR+ IA ALA +PEL++ DE
Sbjct: 125 GLQGKVATQ-RTLELLDLVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADE 183

Query: 457 AVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTE 516
             +ALDV+VQ+++++LL EL+ RLG+A + I+HDL +VR  A R+ VM+ G IVE A  E
Sbjct: 184 PTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQKGCIVEQADCE 243

Query: 517 EIFRNPQHAYTRQLINATP 535
            +F++PQH YT++L+ A P
Sbjct: 244 TLFQSPQHPYTQELLAAEP 262