Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  494 bits (1271), Expect = e-144
 Identities = 271/575 (47%), Positives = 370/575 (64%), Gaps = 43/575 (7%)

Query: 4   PHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTP 63
           P LL+V+ L V FL   G  +A  G+   +  GETL ++GESG GKS +A A++ L+   
Sbjct: 11  PPLLDVRGLDVFFLGSNGPVQAVRGLDLTLQRGETLALVGESGCGKSTTALALLRLL--A 68

Query: 64  PGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVH 123
           PG +  GS+ + GRD+ +LS  + R++ GR I+MIFQ+P++ LNPV+TIG Q+EE    H
Sbjct: 69  PGAVLRGSIQFDGRDILALSPAQLREVRGREISMIFQEPMTSLNPVHTIGTQIEETLRRH 128

Query: 124 GVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADE 183
              S   AR+RAIE+L  V IPEP +RID +PH  SGGQRQR+MI MA+A +P +L+ADE
Sbjct: 129 EKLSALAARKRAIELLDLVRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVADE 188

Query: 184 PTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEAR 243
           PTTALDV++QAQILELL  L+ E  +A+++ITHDL + A  ADRV VM  G  VEE    
Sbjct: 189 PTTALDVTIQAQILELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEASTS 248

Query: 244 AVFENPAHSYTRTLINALPHA-------DDRAP-------------------PRP----- 272
            +F  P+H+YTR L+ A  HA       D R P                   P P     
Sbjct: 249 RLFAAPSHAYTRGLLGASLHAGSALHYVDARLPEIQTRLDAATGERSFALHVPEPNSKVR 308

Query: 273 ARP----AGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSG 328
           A P    A +P+L V+++   Y    G       LHAV  +SFD+ AGET+G+VGESG G
Sbjct: 309 ALPVRTAAAEPLLSVQDLRTDYPKRGG-----GVLHAVDGVSFDIRAGETVGLVGESGCG 363

Query: 329 KSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFD 388
           KST++R LL L   + G  +F G D+ ++  K L  +RR+VQMVFQDPY+S+NPR +VFD
Sbjct: 364 KSTLSRTLLRLVNPASGRIVFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFD 423

Query: 389 IVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACD 448
           I+    ++H  + ++   R+R+  +L  VGL  +  +R+P++FSGGQRQRI IARAL   
Sbjct: 424 IIESVLKVH-GVADRAERRNRIAAILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLR 482

Query: 449 PELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGE 508
           P LVV DE VSALDVSVQ Q+++LL EL++  GL+Y+FI+HDL +VR+ ADR++VM  G+
Sbjct: 483 PSLVVLDEPVSALDVSVQAQILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMSKGQ 542

Query: 509 IVEHATTEEIFRNPQHAYTRQLINATPKPKWQTAA 543
           IVE  +  +I+  PQH YTR LI A P  + + AA
Sbjct: 543 IVETGSHRDIWDRPQHPYTRSLIAAVPGAEQRKAA 577