Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 567 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  431 bits (1109), Expect = e-125
 Identities = 239/537 (44%), Positives = 335/537 (62%), Gaps = 8/537 (1%)

Query: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65
           +L V+DLTV     G       G+S  +  GE L ++GESGSGKS+   A++ L+ +   
Sbjct: 5   VLSVRDLTVKAHLQGETRTLLDGISLDLAKGEILGLVGESGSGKSLFCRALVRLLPSSLL 64

Query: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125
            I  G+V   GRDL+++++ E  ++ G  I MIFQ+P SHL+PV  IG Q+ E    H  
Sbjct: 65  KIEGGAVLLGGRDLTAVTDAEMLEVRGAEIGMIFQNPTSHLDPVMRIGDQIAEGIRYHQG 124

Query: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185
             G +AR  A+EILG++G PEP ++ D YPH+ SGG RQR MIG+A++  P+ILIADEPT
Sbjct: 125 LGGRDARAAAVEILGQIGFPEPVRQYDSYPHELSGGMRQRAMIGVALSCNPQILIADEPT 184

Query: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245
           TALDV++QAQIL+LL  ++   GL+II+ITHDL + A   DR+ VM+ G+++E+G  R +
Sbjct: 185 TALDVTIQAQILKLLMDIRDRRGLSIILITHDLGIVAQTCDRIAVMRGGKLLEQGPKRTI 244

Query: 246 FENPAHSYTRTLINALPHADD-----RAPPRPARPAGKPILEVKNID-KFYTLSSGFFAK 299
              P   YT  LI++ P   +      + P P+  A + +LE+ ++  +F +  S F  K
Sbjct: 245 LSAPQDPYTVRLIHSHPSMPEAVLPATSLPAPSHGATRSLLEIDDLHVRFPSGGSLFRGK 304

Query: 300 PAR-LHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMD 358
            AR + AV  +S  +  GET+GIVGESGSGKST+AR +LGL   S G   F G D+ +  
Sbjct: 305 NARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAMLGLTPISAGHVSFDGIDLSQQR 364

Query: 359 RKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVG 418
              L   R +  MVFQDP++++NPR+T+   ++E  ++ K I        R+ ELL LVG
Sbjct: 365 GAGLTRLRHESAMVFQDPFNALNPRLTIGQTLAEVLKVQKKI-GGADIPARIGELLDLVG 423

Query: 419 LNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRD 478
           L  E A R P   SGGQ QR  IARALA DP L++ DE V+ALDV++Q Q++DL  +L  
Sbjct: 424 LEREFAHRKPRSMSGGQCQRAGIARALAVDPRLIIADECVAALDVTIQAQIVDLFRKLAR 483

Query: 479 RLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535
            L L  IFI HDL IVR+  +R +VM  GEI+E   +E++F  P+H YT  LI A P
Sbjct: 484 DLNLTLIFIAHDLAIVRNLCERTVVMHRGEIIEEGRSEDVFSRPKHPYTAALIAAIP 540



 Score =  185 bits (470), Expect = 4e-51
 Identities = 124/291 (42%), Positives = 161/291 (55%), Gaps = 18/291 (6%)

Query: 6   LLEVKDLTVDFLSLGGAFR--------ATSGVSFHVDAGETLVILGESGSGKSVSASAIM 57
           LLE+ DL V F S G  FR        A SG+S  +  GET+ I+GESGSGKS  A A++
Sbjct: 284 LLEIDDLHVRFPSGGSLFRGKNARAVSAVSGISLRIMPGETVGIVGESGSGKSTLARAML 343

Query: 58  GLIDTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLE 117
           GL  TP   I AG V++ G DLS    G          AM+FQDP + LNP  TIG  L 
Sbjct: 344 GL--TP---ISAGHVSFDGIDLSQ-QRGAGLTRLRHESAMVFQDPFNALNPRLTIGQTLA 397

Query: 118 EVFTVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPE 177
           EV  V     GA+   R  E+L  VG+    +   + P   SGGQ QR  I  A+A+ P 
Sbjct: 398 EVLKVQKKIGGADIPARIGELLDLVGLER--EFAHRKPRSMSGGQCQRAGIARALAVDPR 455

Query: 178 ILIADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIV 237
           ++IADE   ALDV++QAQI++L +KL  +  L +I I HDL +  N+ +R +VM  G I+
Sbjct: 456 LIIADECVAALDVTIQAQIVDLFRKLARDLNLTLIFIAHDLAIVRNLCERTVVMHRGEII 515

Query: 238 EEGEARAVFENPAHSYTRTLINALPHAD-DRA-PPRPARPAGKPILEVKNI 286
           EEG +  VF  P H YT  LI A+P  D DR+       P  +PI  VK +
Sbjct: 516 EEGRSEDVFSRPKHPYTAALIAAIPDIDPDRSLLGHTDAPPVEPIQSVKRL 566