Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  459 bits (1180), Expect = e-133
 Identities = 246/530 (46%), Positives = 338/530 (63%), Gaps = 6/530 (1%)

Query: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65
           +++ + + V F    G  +A   VSF +  GET+ I+GESGSGKSV+A  +MGL+     
Sbjct: 25  VIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRAT 84

Query: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125
                 + Y GRD+   S+ ERR L G RI+MIFQ+P+S LNPVYTIG Q+ E    H  
Sbjct: 85  IAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRR 144

Query: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185
            S   A +RA+E+L  V IP+PE R++QYPHQ SGGQRQR+MI MA+A  P++LIADEPT
Sbjct: 145 VSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPT 204

Query: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245
           TALDV+VQAQIL L++KLQ E G+A+I+ITHDL V    +D V VM+ G + E     A+
Sbjct: 205 TALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEAL 264

Query: 246 FENPAHSYTRTLINALPHADDRAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKP--ARL 303
           F +P H+YTR L+++ P       P  A      +L+ +N+   +TL  G F +P    L
Sbjct: 265 FADPQHAYTRRLLSSEPSGSANPLPDDA----PILLDGRNVRVSFTLKKGGFFRPEFKEL 320

Query: 304 HAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLL 363
            AV  LS ++   ET+G+VGESGSGK+T  + L+ L    GGE  F G  +   DRK + 
Sbjct: 321 VAVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMR 380

Query: 364 AFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEH 423
             R K+Q+VFQDP+SS+NPRM+V  I+ E   ++     +     RV + L   G+    
Sbjct: 381 PLRSKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNI 440

Query: 424 AKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLA 483
             R+PH+FSGGQRQRIAIARA+A +PE ++ DE  SALD+SVQ Q+I+LL  L+D  GL+
Sbjct: 441 LSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLS 500

Query: 484 YIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533
           Y+ I+HDL +VR    R++VM+ G+IVE     E+  NP+ AYT +L+ A
Sbjct: 501 YLVISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKA 550



 Score =  209 bits (532), Expect = 2e-58
 Identities = 112/266 (42%), Positives = 171/266 (64%), Gaps = 15/266 (5%)

Query: 278 KPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLL 337
           +P+++ + +   + + +G       + AVK++SF +  GET+ IVGESGSGKS  AR ++
Sbjct: 23  RPVIDARKVAVSFKVENG------TVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVM 76

Query: 338 GLNE-----ASGGEALFHGRDVLKMDRKQLLAFRR-KVQMVFQDPYSSMNPRMTVFDIVS 391
           GL       A      + GRDVLK  +++  A R  ++ M+FQ+P SS+NP  T+   + 
Sbjct: 77  GLLSKRATIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQII 136

Query: 392 EPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAK--RYPHQFSGGQRQRIAIARALACDP 449
           E  R H+ +  +    +R  ELL  V +    A+  +YPHQ SGGQRQR+ IA ALA DP
Sbjct: 137 EAIRAHRRVSRRAA-AERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDP 195

Query: 450 ELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEI 509
           ++++ DE  +ALDV+VQ Q+++L+ +L+  LG+A I ITHDL +VR F+D + VM+ GE+
Sbjct: 196 DVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEV 255

Query: 510 VEHATTEEIFRNPQHAYTRQLINATP 535
            EH TTE +F +PQHAYTR+L+++ P
Sbjct: 256 KEHNTTEALFADPQHAYTRRLLSSEP 281