Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 534 a.a., microcin C transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  471 bits (1212), Expect = e-137
 Identities = 252/535 (47%), Positives = 355/535 (66%), Gaps = 10/535 (1%)

Query: 1   MTGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60
           M+  +L+EV+DL V+F++     R   GVSF +  GETL ++GESGSGKSV+A +I+ L+
Sbjct: 1   MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLL 60

Query: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120
             P     +GS+ Y G+DL   SE   + + G RIAMIFQ+P++ LNP++ I  Q+ E+ 
Sbjct: 61  PYPLARHPSGSIRYEGKDLLQQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEIL 120

Query: 121 TVHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILI 180
            +H   +G EA  R +E+L  VGIPEP KR+   PH+ SGGQRQR+MI MA+A  PE+LI
Sbjct: 121 LLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 181 ADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEG 240
           ADEPTTALDV+VQ +ILELLK+LQA  G+A+++I+HDL +   +A RV VM+ G+IVE+ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA 240

Query: 241 EARAVFENPAHSYTRTLINALPHADDRAPPRPA-RPAGKPILEVKNIDKFYTLSSGFFAK 299
           E   +F +P H YT+ LINA P         PA  P G P+LEV ++  ++ +  GF  +
Sbjct: 241 ECATLFSSPQHHYTQMLINAEPSG------LPAHNPVGAPLLEVDDLKVWFPIKKGFLQR 294

Query: 300 PA-RLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGGEALFHGRDVLKMD 358
               + AV  ++F +  G+T+GIVGESGSGKST+   +L L  + GG   FHG+++  ++
Sbjct: 295 TVDHVKAVDGVNFSLPQGQTLGIVGESGSGKSTLGLAILRLISSQGG-IRFHGQNLEGLN 353

Query: 359 RKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVG 418
           +K +   RR++Q+VFQDP+ S++PRM V DIV E  RIH+ I         +   L  VG
Sbjct: 354 QKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHR-IGTAQEQEAAIIAALEEVG 412

Query: 419 LNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRD 478
           L+P    RYPH+FSGGQRQRIAIARAL   P L++ DE  SALD +VQ QV++LL  L+ 
Sbjct: 413 LDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQ 472

Query: 479 RLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINA 533
           +  L Y+FI+HDL +V+  + +++V+K G +VE    + IF  PQH YTRQL+ A
Sbjct: 473 KYNLTYLFISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEA 527



 Score =  187 bits (476), Expect = 7e-52
 Identities = 105/239 (43%), Positives = 151/239 (63%), Gaps = 11/239 (4%)

Query: 306 VKNLSFDVAAGETIGIVGESGSGKSTVARVLLGL-----NEASGGEALFHGRDVLKMDRK 360
           V  +SFD+  GET+ +VGESGSGKS  A  +L L          G   + G+D+L+   K
Sbjct: 26  VDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLLQQSEK 85

Query: 361 QLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLVGL 419
            L   R  ++ M+FQ+P +S+NP   +   ++E   +HK +  K     R  ELL +VG+
Sbjct: 86  TLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATA-RTLELLDMVGI 144

Query: 420 NPEHAKRY---PHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAEL 476
            PE  KR    PH+ SGGQRQR+ IA ALA +PEL++ DE  +ALDV+VQ+++++LL EL
Sbjct: 145 -PEPRKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKEL 203

Query: 477 RDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535
           + R+G+A + I+HDL +VR  A R+ VM+ G+IVE A    +F +PQH YT+ LINA P
Sbjct: 204 QARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQAECATLFSSPQHHYTQMLINAEP 262