Pairwise Alignments

Query, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 597 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  452 bits (1164), Expect = e-131
 Identities = 245/552 (44%), Positives = 344/552 (62%), Gaps = 22/552 (3%)

Query: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65
           +L ++ L   F   G        +SF +   ET+ ++GESGSGKSV+A +IM L+  P  
Sbjct: 5   VLRIEQLNTAFRVNGEWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLAGPQV 64

Query: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125
               G   + GRDL +L   E + + G RI M+FQ+P++ LNPV  IG Q+ EV   H  
Sbjct: 65  RT-TGRALFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLRRHRG 123

Query: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185
              A AR  A+ +L +V IP    R+D+YP  FSGG RQR++I +A+A  P +LI DEPT
Sbjct: 124 MDHAGARAEAVRLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHPRLLIVDEPT 183

Query: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245
           TALDV++QAQIL L+K LQ E+G++I+ ITHD+ V A +ADR +VM  G  VE  + R +
Sbjct: 184 TALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMADTRRL 243

Query: 246 FENPAHSYTRTLINALPHADDRAPPR-PARPA------------------GKPILEVKNI 286
           F  P H Y++TL +ALP   D A  R P R A                  G+P+L V+ +
Sbjct: 244 FRAPQHPYSKTLFSALPRLGDMADSRLPRRFALFGQSAAASAPLADTVTPGEPVLAVRGL 303

Query: 287 DKFYTLSSGFFAK-PARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEASGG 345
            K + + SG+  +   R+HAV+N+SF +  GET+ +VGESG GKST  R +L L E +GG
Sbjct: 304 IKRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLEPNGG 363

Query: 346 EALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTR 405
                G ++L      L   R + QM+FQDPY S+NPR+TV   ++EP   H  +    +
Sbjct: 364 AVSLCGENMLAAGASALAGLRMRAQMIFQDPYDSLNPRLTVGCAIAEPMISH-GLASARQ 422

Query: 406 WRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSV 465
            R +V ELL  VGL  + A+RYPHQFSGGQRQR+ IARALA +P +++ DEAVSALD++V
Sbjct: 423 ARQKVAELLEKVGLQADMAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALDMTV 482

Query: 466 QVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHA 525
           + Q+++LL +L+ +LGLAY+FI+HD+ +V   + R+ VM  GEIVE    + +F +PQH 
Sbjct: 483 KAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQHP 542

Query: 526 YTRQLINATPKP 537
           YTR+L+ A P P
Sbjct: 543 YTRRLLAAVPVP 554



 Score =  191 bits (484), Expect = 9e-53
 Identities = 109/245 (44%), Positives = 150/245 (61%), Gaps = 8/245 (3%)

Query: 21  GAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDICAGSVAYRGRDLS 80
           G   A   VSF +  GETL ++GESG GKS +  AI+ L++ P G    G+V+  G ++ 
Sbjct: 319 GRVHAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLE-PNG----GAVSLCGENML 373

Query: 81  SLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGVASGAEARQRAIEILG 140
           +        L   R  MIFQDP   LNP  T+G  + E    HG+AS  +ARQ+  E+L 
Sbjct: 374 AAGASALAGLR-MRAQMIFQDPYDSLNPRLTVGCAIAEPMISHGLASARQARQKVAELLE 432

Query: 141 RVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTTALDVSVQAQILELL 200
           +VG+       ++YPHQFSGGQRQR+ I  A+AL P ++IADE  +ALD++V+AQI+ LL
Sbjct: 433 KVGLQAD--MAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALDMTVKAQIVNLL 490

Query: 201 KKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAVFENPAHSYTRTLINA 260
             LQ + GLA + I+HD+ V   ++ RV VM  G IVE G  +AVF +P H YTR L+ A
Sbjct: 491 LDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQHPYTRRLLAA 550

Query: 261 LPHAD 265
           +P  D
Sbjct: 551 VPVPD 555