Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  209 bits (531), Expect = 9e-59
 Identities = 126/333 (37%), Positives = 179/333 (53%), Gaps = 30/333 (9%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLT-GDPAYLYLPLDSSEAQRQAFSET-HGFND 58
           MF FIL R    +   IG+ +L FFL RL  GDP          +  R A   T +GF+ 
Sbjct: 1   MFRFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIETMAGERGIDPARHAELRTAYGFDK 60

Query: 59  PLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSL 118
           P++VQ+G Y+  +   D G ++      M   L  FP T++LAV AI+ +L   +  G L
Sbjct: 61  PVIVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGLPAGIL 120

Query: 119 AAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSG-----------TG 167
           AA R NS+FD      SL G S P FW  ++ IL FSV LG  P SG           TG
Sbjct: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYYIEPETG 180

Query: 168 TAL-----------------HWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAK 210
             L                 H I+P  VL   P  ++ ++ R  M+  L   Y++TARAK
Sbjct: 181 FLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAK 240

Query: 211 GVNRSRIVFRHALRNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDF 270
           G++R R+V  HALRN+L+PV+TV G     L  GA++ ETIF WPG+GK +I+AI RRD+
Sbjct: 241 GLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDY 300

Query: 271 ALIQATVLVTAIAIFVLNIAIDLVYARLDPRIR 303
            ++Q  +L+    + ++N+ +D+ Y  ++PRIR
Sbjct: 301 PVLQGGMLLLGGIVMLVNLLVDVAYGVINPRIR 333