Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Escherichia coli ECRC62

 Score =  195 bits (495), Expect = 1e-54
 Identities = 118/337 (35%), Positives = 179/337 (53%), Gaps = 35/337 (10%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVF-FLSRLTGDPAYLYLPLD--SSEAQRQAFSETHGFN 57
           M  FILRR G  +   IG+ +L F F+  + GDP  +       S E   Q  +E  G +
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEL-GLD 59

Query: 58  DPLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGS 117
            P+  Q+  Y+  +   D G ++    P  E  +  F  TL+L V A++ +    + VG 
Sbjct: 60  KPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119

Query: 118 LAAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSG------------ 165
           LAA +  S+FD  A   +L G S P FW  ++ I++ SV   L P SG            
Sbjct: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179

Query: 166 --TGTAL-----------------HWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKT 206
             TG  L                 H I+P  VL   P  ++V++ R +M+  L   Y++T
Sbjct: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239

Query: 207 ARAKGVNRSRIVFRHALRNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIV 266
           ARAKG+ R R++  HALRN++LPV+TV G    +L+ GA++ ETIF WPG+G+ +IDA+ 
Sbjct: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299

Query: 267 RRDFALIQATVLVTAIAIFVLNIAIDLVYARLDPRIR 303
           RRD+ ++Q  VL+ A  I ++N+ +DL+Y  ++PRIR
Sbjct: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336