Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Dickeya dianthicola ME23

 Score =  196 bits (497), Expect = 8e-55
 Identities = 113/336 (33%), Positives = 179/336 (53%), Gaps = 33/336 (9%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVF-FLSRLTGDPAYLYLPLDSSEAQRQA-FSETHGFND 58
           M  FILRR G  +   IG+ +L F F+  + GDP  +         +R A      G + 
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERGISPERHAQLMAELGLDK 60

Query: 59  PLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSL 118
           PL  Q+  Y+  +   D G +L    P  +  +  F  TL+L V A++ ++   + VG L
Sbjct: 61  PLWDQYLHYINGVLHGDLGMSLKSRIPVWDEFVPRFKATLELGVCAMIFAVIVGIPVGVL 120

Query: 119 AAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGT------------ 166
           AA +  S+FD  A + +L G S P FW  ++ I++ SV L L P SG             
Sbjct: 121 AAVKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDALP 180

Query: 167 -------------------GTALHWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTA 207
                                 +H ++P  VL   P  ++V++ R  M+  L   Y++TA
Sbjct: 181 LSGFMLIDTLIWGADGDFKDAVMHMVLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIRTA 240

Query: 208 RAKGVNRSRIVFRHALRNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVR 267
           RAKG++R R++  HALRN++LPV+TV G    +++ GA++ ETIF WPG+G+ +IDA+ R
Sbjct: 241 RAKGLSRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 268 RDFALIQATVLVTAIAIFVLNIAIDLVYARLDPRIR 303
           RD+ ++Q+ VL+ A  I ++N+ +DL+Y  ++PRIR
Sbjct: 301 RDYPVVQSGVLLVATMIILVNLLVDLLYGVVNPRIR 336