Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., oligopeptide ABC transporter permease OppB from Dickeya dianthicola ME23

 Score =  182 bits (463), Expect = 7e-51
 Identities = 106/308 (34%), Positives = 176/308 (57%), Gaps = 6/308 (1%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETHGFNDPL 60
           M  FI RR  +++  +  L+ + FF+ RL     +        E      ++ H  NDP+
Sbjct: 1   MLKFIFRRCLEAIPTLFILITISFFMMRLAPGSPFTGERNLPPEVMANIEAKYH-LNDPM 59

Query: 61  VVQFGRYLVDLARFDFGDALS-RNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLA 119
           + Q+G YLV L + DFG +   ++    ++ + AFP + KL   A +L++   V  G +A
Sbjct: 60  IKQYGNYLVQLLKGDFGPSFKYKDYSVNDLVVRAFPVSAKLGAAAFLLAVVLGVTSGVIA 119

Query: 120 AARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGT--GTALHWIMPIF 177
           A   NS +D      ++ G   P F VA + +L+F++ L  LP  G   G   + I+P+ 
Sbjct: 120 ALNQNSKWDYTVMGFAMTGVVIPSFVVAPLLVLIFAITLRWLPGGGWNGGAPKYIILPMV 179

Query: 178 VLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSLLPVITVAGDL 237
            L+L     + ++ RG+M+  L S +++TARAKG+   RI+ RHAL+ +LLPV++  G  
Sbjct: 180 ALSLSYIASIARITRGSMIEVLHSNFIRTARAKGLPLRRIILRHALKPALLPVLSYMGPA 239

Query: 238 AASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALI-QATVLVTAIAIFVLNIAIDLVYA 296
              ++ G++V+ETIFG PGIG+L ++  + RD++L+   TVLV A+ I + N  ID++YA
Sbjct: 240 FVGIITGSMVIETIFGLPGIGQLFVNGALNRDYSLVLSLTVLVGALTI-LFNAVIDVLYA 298

Query: 297 RLDPRIRF 304
            +DP+IR+
Sbjct: 299 VIDPKIRY 306