Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  190 bits (482), Expect = 4e-53
 Identities = 103/315 (32%), Positives = 173/315 (54%), Gaps = 17/315 (5%)

Query: 5   ILRRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETH---GFNDPLV 61
           +LR   Q++  +  ++ L FF+ +L    A  Y+  +S  A ++  ++     G + PL+
Sbjct: 16  LLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIRRAFGLDLPLL 75

Query: 62  VQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAAA 121
            Q   Y   LA F  G +     P  ++ +E  P TL L V+AIV++L   +  G++ A 
Sbjct: 76  DQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGTIMAL 135

Query: 122 RPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGT------ALHWI-- 173
                 D+I S ASL   S P FW+ ++ I+VFSV LG LP  G  T         W+  
Sbjct: 136 NATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGASSGGFGWLID 195

Query: 174 ------MPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSL 227
                 +P   L L    +  ++ R +++  +   +V+TA+AKG+   ++V RH LRN+L
Sbjct: 196 RVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPRQVVLRHVLRNAL 255

Query: 228 LPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAIFVL 287
           +P+ TVAG   A ++ GA+V+ET+F WPG+G+L  DA++ R++ L+   +LV+++ +  +
Sbjct: 256 IPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLGIMLVSSVLVICV 315

Query: 288 NIAIDLVYARLDPRI 302
           N  +D++ A LDPRI
Sbjct: 316 NAIVDIIQAALDPRI 330