Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  184 bits (467), Expect = 2e-51
 Identities = 103/311 (33%), Positives = 168/311 (54%), Gaps = 16/311 (5%)

Query: 11  QSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETHGFNDPLVVQFGRYLVD 70
           Q+++  + + ++VF    L G P    LP +++   R       G + PL  QF  +L  
Sbjct: 2   QAILVALAMALIVFVGLHLIGSPIETLLPPEATYDDRLRLIADLGLDRPLYEQFFLFLKG 61

Query: 71  LARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAAARPNSLFDKI 130
           L + + G +     PA+E+ L   P TL+LA  A++LSL   V +G  A  +P S   +I
Sbjct: 62  LLQGNLGVSYVYKEPAVELILSRLPATLELAFAAVLLSLIVGVPLGLAAGWKPESPLARI 121

Query: 131 ASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTA----------------LHWIM 174
               S+ G S P FW+A++ I++FSV LG LP+SG G                   H ++
Sbjct: 122 IMIGSIFGFSLPIFWIAVLLIMIFSVQLGWLPSSGRGATEILFGIPWSFVTLDGLRHMLL 181

Query: 175 PIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSLLPVITVA 234
           P   L+L    ++ ++    +  A++S YV+ ARAKG++  RI+  H L+N ++PV+TV 
Sbjct: 182 PAISLSLFNISMVTRLTEAGVREAMSSEYVRFARAKGLSPKRILSVHVLKNVMIPVVTVV 241

Query: 235 GDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAIFVLNIAIDLV 294
           G      +  +VV ETIF WPG+GK++ID+I   D  +I A +++  +   ++N+ +D+ 
Sbjct: 242 GLDIGQTIAFSVVTETIFAWPGVGKIIIDSIAALDRPVIVAYLMLVVVMFVIINLVVDVT 301

Query: 295 YARLDPRIRFE 305
           Y  LDPRIR +
Sbjct: 302 YRLLDPRIRLQ 312