Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 322 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  204 bits (519), Expect = 2e-57
 Identities = 115/319 (36%), Positives = 176/319 (55%), Gaps = 16/319 (5%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETHGFNDPL 60
           M  FI++R G +++ ++ + ++ F + RL GDP  L +   +S+  R A  E  G ND L
Sbjct: 1   MLVFIIKRLGNAVLVMLSVALIAFLIFRLAGDPVELMVGEQTSQEDRAALRERLGLNDSL 60

Query: 61  VVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAA 120
             Q+ R++ D A+ +FG +    +  + +  E FP TL+L ++A V+SL   + +G L A
Sbjct: 61  PTQYLRFVKDAAQGNFGVSYRNGQQVLPLIAERFPATLELVLVATVISLVVGLPLGVLTA 120

Query: 121 ARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTA--LHW------ 172
            R    + +     S+ G S P F V I+ ILVFSV LG  P  G G    L W      
Sbjct: 121 IRRGKWYTEGLQFLSIVGVSLPSFVVGILLILVFSVSLGWAPAFGRGDVVQLGWWSTGLL 180

Query: 173 --------IMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALR 224
                   I+P   L+L    L++++VR  M+  L S +VK ARA+G+ R RI FRHALR
Sbjct: 181 TSSGRAALILPAIALSLYQITLVMRLVRAEMLEVLRSDFVKFARARGIPRWRIYFRHALR 240

Query: 225 NSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAI 284
           N L+PV+T+      SL+  A++ ET+F WPG+G L I A+   D  ++ A + + +   
Sbjct: 241 NCLMPVVTLTTMNVGSLIAFALITETVFQWPGMGMLFIQAVTFLDIPVMAAYLCIISFIF 300

Query: 285 FVLNIAIDLVYARLDPRIR 303
            VLN  +D+ YA +DPR+R
Sbjct: 301 VVLNTFVDIAYAVIDPRLR 319