Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  196 bits (498), Expect = 6e-55
 Identities = 120/333 (36%), Positives = 180/333 (54%), Gaps = 30/333 (9%)

Query: 1   MFAFILRRAGQSLIAVIGLLVLVF-FLSRLTGDPAYLYLPLDSSEAQRQA-FSETHGFND 58
           M  FI  +    +   +G+ ++ F F+  L GDP  L         +R A  +E  GF  
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPVLLMAGERGISPERHAQLAEQLGFAQ 60

Query: 59  PLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSL 118
           P+  Q+  +L  L + D G++L   +P +   L  FP T++L ++AI+++    V VG +
Sbjct: 61  PIWEQYLHFLGRLLQGDLGNSLVTKKPVLTEFLALFPATVELGLVAIIIATVIGVPVGVI 120

Query: 119 AAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSG-----------TG 167
           AA R  S FD+I+ T +L G S P FW  ++ I++FS  L   P SG           TG
Sbjct: 121 AAIRRGSWFDQISMTTALVGFSMPIFWWGLLLIIMFSGILQWTPVSGRISLMYFFPSVTG 180

Query: 168 TAL-----------------HWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAK 210
             L                 H I+P  VL   P  ++ +  R  M+  L   YV+TARAK
Sbjct: 181 FMLIDSLISGQKGAFASALSHLILPSVVLATIPLAVIARQTRSAMLEVLGEDYVRTARAK 240

Query: 211 GVNRSRIVFRHALRNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDF 270
           G++ SR+V  HALRN+++PVIT  G     L+ GA++ ETIF WPGIGK MID+I RRD+
Sbjct: 241 GMSASRVVGIHALRNAMIPVITTIGLQIGVLMAGAILTETIFSWPGIGKWMIDSISRRDY 300

Query: 271 ALIQATVLVTAIAIFVLNIAIDLVYARLDPRIR 303
            ++Q+ +L+ A  + V+N+ +DL Y  ++PRIR
Sbjct: 301 PVVQSGLLLIAGLVMVVNLLVDLTYGLINPRIR 333