Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 329 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  188 bits (477), Expect = 2e-52
 Identities = 109/313 (34%), Positives = 175/313 (55%), Gaps = 17/313 (5%)

Query: 7   RRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETH---GFNDPLVVQ 63
           R A Q++  V+G+++L FFL +L    A   L  ++  A  +  +E     G + P+V Q
Sbjct: 13  RVAIQAVPTVLGIVILNFFLLQLAPGDAADVLAAEAGSATVETMAEMRSRFGLDLPIVHQ 72

Query: 64  FGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAAARP 123
              YL +LA+F  G +     P  ++  +  P TL L   A+ +++   V +GS+ A   
Sbjct: 73  LMNYLGNLAQFSLGFSPRYGMPVADLIGQRLPGTLALMGAALGIAIFVGVFLGSIMALFS 132

Query: 124 NSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTA-------------- 169
             L D+I S  SL   S P FW+ ++ IL FSV LG LP+ G  T               
Sbjct: 133 GKLPDRIISIGSLIFYSVPGFWIGLMLILTFSVKLGWLPSGGDSTIGSSLTGFAAFLDRL 192

Query: 170 LHWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSLLP 229
            + ++P   L L    +  ++ R  M+   +  YV+TARAKGV+  R++ RH LRN+L+P
Sbjct: 193 RYIVLPALSLALYFLAIYARLTRAAMLEVKSQDYVRTARAKGVSPFRLITRHILRNALIP 252

Query: 230 VITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAIFVLNI 289
           + T+AG     L+ GAVVVET+F WPG+G+L  +A++ RDF+++   +L++++ + ++N 
Sbjct: 253 ITTMAGMHIGGLLGGAVVVETVFSWPGLGRLAFEAVMARDFSVLLGILLLSSLVVIIVNA 312

Query: 290 AIDLVYARLDPRI 302
           A+DL+ A LDPRI
Sbjct: 313 AVDLLQAWLDPRI 325