Pairwise Alignments

Query, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 329 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  194 bits (493), Expect = 2e-54
 Identities = 118/319 (36%), Positives = 176/319 (55%), Gaps = 20/319 (6%)

Query: 3   AFILRRAGQSLIAVIGLLVLVF---FLSRLTGDP--AYLYLPLDSSEAQRQAFSETHGFN 57
           A +LRR   S I V+ L+VL+F    L   +GD   AYL          R A  E +G N
Sbjct: 5   ATLLRRRAISAIPVL-LIVLIFTFVLLENASGDAVDAYLVSIGGGDAGLRDALREQYGLN 63

Query: 58  DPLVVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGS 117
             ++ +F  Y   + R DFG +L+ +RP + + LE  P TL L   A  L+      +G 
Sbjct: 64  GSMLARFWLYASSVLRLDFGWSLAFDRPVLGLILERLPNTLLLMGSATALAFILGTTLGI 123

Query: 118 LAAARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGT--------- 168
           +A ARP  L D++ ST SLA  + P FW+ +V  +VF+V L  LPTSG  T         
Sbjct: 124 VAGARPGGLMDRVLSTLSLALYATPGFWLGLVLAIVFAVQLRWLPTSGIETIASGKQGFA 183

Query: 169 -----ALHWIMPIFVLTLRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHAL 223
                A H ++P+  L L    L ++V+R  M       +V  A AKG++R RIV RH  
Sbjct: 184 RALDIARHLVLPVASLGLIYLALFLRVMRTAMAAIWPLDFVLFAEAKGLSRRRIVLRHVA 243

Query: 224 RNSLLPVITVAGDLAASLVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIA 283
           RN+ LP++TV G  AA+++ G+VV+E++F  PG G+L  +A+  RD  L+   +L +A+ 
Sbjct: 244 RNAALPLVTVLGLQAATMLGGSVVIESVFAIPGFGRLAQEAVSGRDTPLLMGIILTSAVF 303

Query: 284 IFVLNIAIDLVYARLDPRI 302
           + ++N+A+D++YA  DPRI
Sbjct: 304 VILVNLAVDILYAVFDPRI 322