Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  104 bits (260), Expect = 7e-27
 Identities = 109/450 (24%), Positives = 195/450 (43%), Gaps = 51/450 (11%)

Query: 64  VIDTEKGTVG--PWLAEKWE-QVDDLTWRVHLKSGVKFQDGAAF------DAEAVVKSIN 114
           +++ EKG  G  P LA KW+   D +T+  HL+ GVKF     F      +A+ V+ + N
Sbjct: 62  LVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFN 121

Query: 115 RLMNP----------------GLTCDS------RSKFGDVKLTPKAVDAQTVEISSDSPV 152
           R+++P                G++ +       ++    V +T   VDA  ++  + S  
Sbjct: 122 RMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFA 181

Query: 153 PIMPTLLGTVQIVSPNMPFDKESNDPVGTGPYVVES-KSNEQIVLKRHDAYWG-AKPDVT 210
            I+       Q++    P D     P+GTGP+V +  + + QI    +  YW  ++  + 
Sbjct: 182 AILSAEYAE-QLLKAGKPSDINQK-PIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLD 239

Query: 211 RATYVWRSESAIRAAMVESGEADMT--PSIAVQDATNAESDFAYLNSETTRM---RIDAQ 265
           +  +   +++++R   +++GE  +T  P  A  DA  A+ +   L      +     + +
Sbjct: 240 QLIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVR 299

Query: 266 IPPLDDVRIRKALNMAIDWDGMGEALFGKDVLRASQMVVPGVRGHNPDIKPWTYNPEEAM 325
             P D + +R+AL+MA++   +  A++      A   + P    ++  IK   YNPE+A 
Sbjct: 300 HKPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAK 359

Query: 326 KLVEEAKAAGAPVDKEIVLIG---RNGFFPNSAESLEAMRSMWQEIGLNVSIRQLEAADW 382
           +L+   KAAG     EI L     +  + PN+    E ++S W +IGL V I   E   W
Sbjct: 360 ELL---KAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYE---W 413

Query: 383 VRYLDKPFPEGRGPTLFQQQHDNNTGD--AGFTAPVMYLSEGQYSTIADPDLDVVLKKAM 440
             Y+ +        +L     DN   D   G       +    YS   DP  D ++K+A 
Sbjct: 414 GEYIKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQAK 473

Query: 441 AATGDEREKLFQEVFAKVHDEIVADVPMYH 470
             T  E+  +  +   ++  + V   P+ H
Sbjct: 474 VVTDREQRTVLYKQAQQLLKQQVPITPVAH 503