Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 105/434 (24%), Positives = 183/434 (42%), Gaps = 61/434 (14%)

Query: 2   TIRYCTRAVALLTATLFSGVAMAA---EGEVKIVLPE-QPANLDPCRSIRSDIGRIINSN 57
           T+   +R++ALL  T  + + +A      +  +   E  P N  P  +     G   +  
Sbjct: 6   TVSRRSRSLALLAPTAIAALTLACGAVSAKTLVYCSEGSPENFYPGMNTT---GTSFDVT 62

Query: 58  ITETLTVIDTEKG--TVGPWLAEKWE-QVDDLTWRVHLKSGVK-------FQDGAAFDAE 107
                T+++ E+G   V P LAEKW+   D   +  HL+ GVK       F+    F+A+
Sbjct: 63  TQVYNTIVEFERGGTKVVPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNAD 122

Query: 108 AVVKSINRLMNPG-----LTCDSRSKFGDVKL-----TPKAVDAQTVEISSDSP-VPIMP 156
             +  + R          +T  + S F D+ +     T   +D  TV+I  + P  P + 
Sbjct: 123 DFIFMLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPFLA 182

Query: 157 TLLG----------TVQIVSPNMPFDKESNDPVGTGP-YVVESKSNEQIVLKRHDAYWGA 205
            L             + ++    P +K   DP+GTGP Y+V+ + +  I  K    YWG 
Sbjct: 183 NLAMQYAGIQSKEYAIAMLKAGTP-EKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWGG 241

Query: 206 KPDVTRATYVWRSESAIRAAMVESGEADMTPSIAVQDATNAESD------------FAYL 253
           K  +    +    ++++R A ++ GE  + P     D      D              YL
Sbjct: 242 KAKIDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYL 301

Query: 254 NSETTRMRIDAQIPPLDDVRIRKALNMAIDWDGMGEALFGKDVLRASQMVVPGVRGHNPD 313
           +  TT+        P DDVR+RKA+NMAI+   + + ++    + A   + P +  +N  
Sbjct: 302 SYNTTKK-------PFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYNDA 354

Query: 314 IKPWTYNPEEAMKLVEEA-KAAGAPVDKEIVLIGRNGFFPNSAESLEAMRSMWQEIGLNV 372
           +K   Y+PE A KL+ +A    G   D   + + R  + PN+    E M++   +I +  
Sbjct: 355 VKDDPYDPEAAKKLLAQAGYPDGFSTDLWAMPVQR-PYNPNAKRIAELMQADLAKINVKA 413

Query: 373 SIRQLEAADWVRYL 386
            I+  E  ++ + L
Sbjct: 414 EIKSFEWGEYRKRL 427