Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 497 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  114 bits (286), Expect = 6e-30
 Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 31/398 (7%)

Query: 2   TIRYCTRAVALLTATLFSGVAMAAEGEVKIVLPEQPANLDPCRSIRSDIGRIINSNITET 61
           T+     A A+    L    A A +  + I +P +P  LDP     S I  I   NI ET
Sbjct: 6   TLMTSAMAAAIPGVFLPQARAQAGKNTLTIGMPLEPPGLDPTTGAASAIAEITQYNIFET 65

Query: 62  LTVIDTEKGTVGPWLAEKWEQVDDL-TWRVHLKSGVKFQDGAAFDAEAVVKSINRLMNPG 120
           LT ++ + G+V P LAE W    D+ T+   L+ GV+F++   F+A  V  S +R     
Sbjct: 66  LTKVNAD-GSVTPMLAESWSSSPDMKTFVFKLRKGVRFENDQPFNAHTVKFSFDRAGGAK 124

Query: 121 LTCDSRSKFGDVKLTPKAVDAQTVEISSDSPVPIMPTLLG--TVQIVSPNMPFDKESNDP 178
            T   +  F ++      +D  TV ++S  P P +P +LG  T  IV P    D  +  P
Sbjct: 125 STNKDKRFFSEIGTV--VLDEYTVGVNSTLPNPDLPFMLGQSTACIVEPKSA-DTNATAP 181

Query: 179 VGTGPYVVES-KSNEQIVLKRHDAYWGAK-PDVTRATYVWRSESAIRAAMVESGEADMTP 236
           VGTGPY + + +      L +  +Y       V +  + + S++A + A + + + D+ P
Sbjct: 182 VGTGPYKLSAWQRGASCTLVKSPSYRDQNLAKVPKFVFRFMSDTAAQTAALMANDIDIFP 241

Query: 237 SIAVQDATNAESDFAYLNSET-TR----MRIDAQIPPLDDVRIRKALNMAIDWDGMGEAL 291
               +     + +  +   E  TR    + I+ +  PLDDVR+R+A+  AID + + +  
Sbjct: 242 RAGTRSVAQFKGNPRFQVIEVGTRGKVILTINNRKKPLDDVRVRRAILAAIDRNAIIQGA 301

Query: 292 ---FGKDVLRASQMVVPG---VRGHNPDIKPWTYNPEEAMKLVEEAKAAGAPVDKEIVLI 345
              FGK +     M  PG       NP      ++ E+A KL+ EA     P++  + L 
Sbjct: 302 ADGFGKPIGSHYAMGAPGFVDTTAMNP------FDIEKAKKLLAEA-GVKTPLELRLQLP 354

Query: 346 GRNGFFPNSAESLEAMRSMWQEIGLNVSIRQLEAADWV 383
             +     + +  E + +   +IG+NV I+ +E A W+
Sbjct: 355 PPS----YARQGGEMIAAQLAQIGINVKIQNVEWAQWL 388