Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 495 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  133 bits (334), Expect = 2e-35
 Identities = 114/387 (29%), Positives = 187/387 (48%), Gaps = 19/387 (4%)

Query: 7   TRAVALLTATLFSGVAMAAEGEVKIVLPEQPANLDPCRSIRSDIGRIINSNITETLTVID 66
           T    +  AT  +G+A   +  + I +  +P  LDP     + I  ++  NI ETLT I+
Sbjct: 10  TAGATVALATPLAGMAQGRKDAIVIGMALEPPGLDPTSGAAAAIAEVVQYNILETLTKIN 69

Query: 67  TEKGTVGPWLAEKWEQVDDL-TWRVHLKSGVKFQDGAAFDAEAVVKSINRLMNPGLTCDS 125
            + G+V P LA+ WE   DL T+   LK GVK+Q+G  F+A AV  S +R  +   T   
Sbjct: 70  AD-GSVTPLLADSWEVSPDLKTYTFKLKRGVKYQNGEPFNAAAVKFSFDRAGSEKSTNKD 128

Query: 126 RSKFGDVKLTPKAVDAQTVEISSDSPVPIMPTLLG--TVQIVSPNMPFDKESNDPVGTGP 183
           +  F +  L+ + VD  TV + +    P +P +LG  T  IV P    +  +  PVGTGP
Sbjct: 129 KRTFAN--LSTQVVDDYTVVVINKEIDPDLPFVLGQATAVIVEPKSA-EGNATKPVGTGP 185

Query: 184 YVVES-KSNEQIVLKRHDAYWG-AKPDVTRATYVWRSESAIRAAMVESGEADMTPSIAV- 240
           Y +++      I L + + +   A   + + T+ + S++A +AA V SG+ D+ P I   
Sbjct: 186 YKLDNWAKGSSITLSKWEGFRSPATAKINKVTFRFISDTAAQAAAVLSGDIDVFPRIGTR 245

Query: 241 ---QDATNAESDFAYLNSET-TRMRIDAQIPPLDDVRIRKALNMAIDWDGMGEALFGKDV 296
              Q   N +       S   T + I+ +  PLDDVR+R+A+  AID   + E       
Sbjct: 246 VVPQFKMNPQFQVILAGSRAKTILSINNRKKPLDDVRVRRAILAAIDRKAVIEGAADGFG 305

Query: 297 LRASQMVVPGVRGHNPDIKPWTYNPEEAMKLVEEAKAAGAPVDKEIVLIGRNGFFPNSAE 356
           +      VPG  G+        ++ E+A KL+ EA     P++ ++ L       P + +
Sbjct: 306 VPIGSHYVPGAAGYVDTTGINPFDIEKAKKLLAEA-GVKTPLELKMTLPPP----PYARQ 360

Query: 357 SLEAMRSMWQEIGLNVSIRQLEAADWV 383
             E + +   +IG+ V ++ +E A W+
Sbjct: 361 GGEVIVAELAKIGIVVKVQNVEWAQWL 387