Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  128 bits (322), Expect = 4e-34
 Identities = 113/396 (28%), Positives = 185/396 (46%), Gaps = 38/396 (9%)

Query: 8   RAVALLTATLFSGVAMAA----EGEVKIVLPEQPANLDPCRSIRSDIGRIINSNITETLT 63
           R ++    ++F G A A      GE++I    +   LDP  +  ++   ++ S+I E L 
Sbjct: 10  RLLSAFLISIFLGSAPATLAQERGELRIATSYKLMTLDPQYANLNENTSLL-SHIYERLV 68

Query: 64  VIDTEKGTVGPWLAEKWEQVDDLTWRVHLKSGVKFQDGAAFDAEAVVKSINRLMN--PGL 121
             D +   + P LA  W  + D  W   L+  V+F DG+AFDA+ VV +I R+ +     
Sbjct: 69  YQD-DNLELKPGLATSWRPLSDTQWAFKLRDKVRFHDGSAFDADDVVYTIERIRDFLKPP 127

Query: 122 TCDSRSKFGDVKLTPKAVDAQTVEISSDSPVPIMPTLLGTVQIVS-PNMPFDKESN---- 176
           +   RS    +K +  A D  TV I +D  VP +P    ++ +++ P+  F+   N    
Sbjct: 128 SGGFRSYVSGIK-SVSAPDPLTVLIETDGAVPNLPLFFSSLFVMNRPSKGFETTENLNAG 186

Query: 177 -DPVGTGPYVVES-KSNEQIVLKRHDAYWGAKPDVTRATYVWRSESAIRAAMVESGEADM 234
             P GTGPY  ES  S E + L R+D YWG KP  ++ T+      A R A + +GE D+
Sbjct: 187 HPPNGTGPYRFESWSSGESLRLARNDDYWGGKPAWSKVTFRVIENPAARVAALSTGEVDV 246

Query: 235 TPSIAVQDATNAESDFAYLNS----ETTRMRIDA---QIP------------PLDDVRIR 275
             +I  +D  + +   A + S        ++ D     +P            P  +  +R
Sbjct: 247 AHAIPARDVASLKQRGAKIASVGAARVNFVQFDVARDTLPGVTDKSGEPIANPFKNPLVR 306

Query: 276 KALNMAIDWDGMGEALFGKDVLRASQMVVPGVRGHNPDIKPWTYNPEEAMKLVEEAKAAG 335
           +AL +A D   + + +       A+Q+   G+ G + ++ P   N +EA  L+ +   AG
Sbjct: 307 RALTLATDRGILVDKILAGYGTAAAQVFPNGLPGTSANLLPEAPNYDEAKMLLAK---AG 363

Query: 336 APVDKEIVLIGRNGFFPNSAESLEAMRSMWQEIGLN 371
            P    +VL G  G +P  AESL+A+   W  IG+N
Sbjct: 364 FPDGFNLVLAGPAGRYPGDAESLQAVAQSWARIGVN 399