Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 558 a.a., Periplasmic oligopeptide-binding protein from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 129/523 (24%), Positives = 208/523 (39%), Gaps = 80/523 (15%)

Query: 9   AVALLTATLFSGVAMAAEGEVKIVLPEQPA----------NLDPCRSIRSDIGRIINSNI 58
           A  +L A +   VA+AA+    + L E+            +LDP   I       I+ ++
Sbjct: 26  AAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDP-HKIEGVPESNISRDL 84

Query: 59  TETLTVIDTEKGTVGPWLAEKWEQVDDLTWRVHLKSGVKFQDGAAFDAEAVVKSINRLMN 118
            E L V D + G   P +AE W+  D   W  HL+   K+ DG    A+  V S  R ++
Sbjct: 85  FEGLLVSDLD-GHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFVYSWQRSVD 143

Query: 119 PGLTCDSRS--KFGDV--------------KLTPKAVDAQTVEISSDSPVPIMPTLL--- 159
           P       S  ++G +               L  KA+D  T+E++   PVP    LL   
Sbjct: 144 PNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPYFYKLLVHP 203

Query: 160 GTVQIVSPNMPFDK------ESNDPVGTGPYVVES-KSNEQIVLKRHDAYW-GAKPDVTR 211
            T  +  P    +K      +  + V  G Y ++    NE+IVL+R   YW  AK  + +
Sbjct: 204 STSPV--PKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNAKTVINQ 261

Query: 212 ATYVWRSESAIRAAMVESGEADMT----PSIAVQDATNAESDFAYLNSE--TTRMRIDAQ 265
            TY+  +          SGE DMT    P    Q       D  +++    T    I+ Q
Sbjct: 262 VTYLPIASEVTDVNRYRSGEIDMTYNNMPIELFQKLKKEIPDEVHVDPYLCTYYYEINNQ 321

Query: 266 IPPLDDVRIRKALNMAIDWDGMGEALFGKDVLRASQMVVP---GVRGHNPDIKPWTYNP- 321
            PP +DVR+R AL + +D D +   +  +  + A     P   G +   P+   W+    
Sbjct: 322 KPPFNDVRVRTALKLGMDRDIIVNKVKAQGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKR 381

Query: 322 -EEAMKLVEEAKAAGAPVDKEIVLIGRNGFFPNSAESLEAMRSMWQE-IGLNVSIRQLEA 379
            EEA KL+ E   AG   DK + +           +   A  S+W++ IG+NV   +L  
Sbjct: 382 NEEAKKLLAE---AGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNV---KLVN 435

Query: 380 ADWVRYLDKPFPEGRGPTLFQQQHDNNTGDAGFTA----PVMYL------SEGQYSTIAD 429
            +W  +LD            + Q   +   AG+ A    P  +L      S    +    
Sbjct: 436 QEWKTFLDT-----------RHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKS 484

Query: 430 PDLDVVLKKAMAATGDEREKLFQEVFAKVHDEIVADVPMYHMI 472
           P  D ++ + +  T + +         +  D+  A VP+Y+ +
Sbjct: 485 PAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYYYV 527