Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  110 bits (275), Expect = 1e-28
 Identities = 107/440 (24%), Positives = 183/440 (41%), Gaps = 47/440 (10%)

Query: 67  TEKGTVGPWLAEKWEQVDDLTWRVHLKSGVKFQDGAAFDAEAVVKSINRLMNPGLTCDSR 126
           T +G +   LA KW+ V +  WR  L+ GVK+ DG  F ++ V+ +++R    G   +S 
Sbjct: 61  TAEGRLVEGLATKWDTVSETKWRFALRDGVKWHDGKPFTSDDVIFTLDR---AGSVPNSP 117

Query: 127 SKFGDVKLTPKAVDA---QTVEISSDSPVPIMPTLLGTVQIVSPNMPFDKESND------ 177
             FG       +V+A     V IS+ +P P +P  L  + IVS +     ++ D      
Sbjct: 118 GGFGGFMRNIASVEADGDNAVIISTKAPAPTLPGDLANIAIVSRHAGEGADTADYNSGKA 177

Query: 178 PVGTGPY-VVESKSNEQIVLKRHDAYWGAKPDVTRATYVWRSESAIRAAMVESGEADMTP 236
            +GTG + +   K   ++ L+R+  +WG K     ATY   S ++ R     +G+ D+  
Sbjct: 178 AIGTGAFRLTTFKQGIEVGLERNPDWWGKKVAWDHATYRMISSASARTTAALAGDVDVID 237

Query: 237 SIAVQDATNAESDFAYLNSETTRMRIDAQIP----------------------PLDDVRI 274
           + A  D    ++        T  +R+    P                      PL D R+
Sbjct: 238 APAATDIARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRV 297

Query: 275 RKALNMAIDWDGMGEALFGKDVLRASQMVVPGVRGHNPDIKPWTYNPEEAMKLVEEAKAA 334
           R AL+ AI+ +G+ + +       + Q +  G   + PDI+P   +   A KL+ +   A
Sbjct: 298 RNALSEAINREGIVDKIMEGTATASGQWLPKGAFSYTPDIQPPKPDAAGAKKLLAD---A 354

Query: 335 GAPVDKEIVLIGRNGFFPNSAESLEAMRSMWQEIGLNVSIRQLEAADWVRYLDKPFP--- 391
           G P   ++ +   N  +PN+   ++A+  MW  IG+  ++   EA  W  +  +      
Sbjct: 355 GYPDGFQLTVHVPNDRYPNAPAVVQAVAQMWTRIGVKTNV---EALPWTTFSSRKSEFAM 411

Query: 392 --EGRGPTLFQQQHDNNTGDAGFTAPVMYLSEGQYSTIADPDLDVVLKKAMAATGDEREK 449
              G G   +           G   P   L     S  ++P LD ++ KAM    D+  +
Sbjct: 412 KLLGLGNATYDAS-SMLVNVLGTVDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDKARE 470

Query: 450 LFQEVFAKVHDEIVADVPMY 469
                  KV     A +P+Y
Sbjct: 471 AALIEAVKVAITDGAIIPLY 490