Pairwise Alignments

Query, 502 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 532 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 95/358 (26%), Positives = 161/358 (44%), Gaps = 39/358 (10%)

Query: 9   AVALLTATLFSGVAMAAEGEV---KIVLPEQPAN---LDPCRSIRSDIGRIINSNITETL 62
           A A L A L   + +++  E    ++++    +N   LDP      +  +++N N+ +TL
Sbjct: 6   ATAALGALLIGAMPLSSFAETPKDQLIVATTMSNILTLDPAAITGRETVQVLN-NVYDTL 64

Query: 63  TVIDTEKGTVGPWLAEKWEQVDDL-TWRVHLKSGVKFQDGAAFDAEAVVKSINRLMNPGL 121
            V+  E  +V P LAE+WE  +D  + R +L++  +F  G    A+ V  S+ RL+   L
Sbjct: 65  VVLSPEDRSVQPRLAERWEIAEDRKSIRFYLRADARFASGNVVTAKDVAWSLKRLLARNL 124

Query: 122 TCDSRSKFGDVKLTPK-----AVDAQTVEISSDSPVPIMPTLL-------GTVQIVSPNM 169
              S  K    KL        A + QT  ++   P P  P LL       G   I+    
Sbjct: 125 AQSSFLKTRGFKLEEADKLFVAENDQTFVLNI--PKPDDPNLLLMILAQNGPGSIIDSKT 182

Query: 170 PFDKESN----------DPVGTGPY-VVESKSNEQIVLKRHDAYWGAKPDVTRATYVWRS 218
             + E +          +  G+GP+ + + KSNE I+L R+D YWG K  + R       
Sbjct: 183 ALENEKDGDLGGAWLTLNSAGSGPFKLTQWKSNEYIILTRNDDYWGEKAKMKRILMRHLP 242

Query: 219 ESAIRAAMVESGEADMTPSIAVQDATNAESDFAYLNSETT-----RMRIDAQIPPLDDVR 273
           ES  +  M+E G+ D+  S+   D  + E+D A     T       + +  +     + +
Sbjct: 243 ESQSQRLMLEKGDIDVAYSLQAPDLKSLEADKAVTIESTPGSGFYYLSVSMKNEKFANKK 302

Query: 274 IRKALNMAIDWDGMGEALFGKDVLRASQMVVPGVRGHNPDIKPWTYNPEEAMKLVEEA 331
           +R+AL   ID+DG+ +A+         + +  GV G  PD + +  + E+A  L+ EA
Sbjct: 303 VREALRYLIDYDGLDKAVMPYYGKLHQRSLSTGVMGALPD-QGYKLDIEKAKALLTEA 359