Pairwise Alignments

Query, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

Subject, 636 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score =  278 bits (711), Expect = 5e-79
 Identities = 220/640 (34%), Positives = 331/640 (51%), Gaps = 40/640 (6%)

Query: 4   HSEHIREIERVSRG---LPVRRDETVVKSWLRCLEHHRLDPAQSCEAYIVPETR--LREH 58
           H      ++  S G   L + RDE +  SW R L H  LD  Q  +  +  E    LR  
Sbjct: 14  HESREARLKLASEGELPLGMLRDE-IDASWRRSLGHG-LDCLQGEQVGLGLEQGHDLRLL 71

Query: 59  RQQSEDLIAIARSGLENLFRQVAGQNYVLLLSDREGVTVEFLGDPLFGNSLRKAGL---Y 115
            +++  LI      L+ L  +  G+  +++L D +   +   G     + L++ GL   +
Sbjct: 72  LERNRLLIDAVTPELDYLVAR-QGKAGIVILGDAQANVLAIEGQK---HVLQREGLRDLH 127

Query: 116 LGSEWSEWRAGTCAVGACLETGEALTIHQTDHFDNTHTPLSCTAAPIYDIQGELSAVLDI 175
            GS WSE   GT A+G  +  G    I+  +H+ +  +P SCT+ P+ D +GE+  VLDI
Sbjct: 128 PGSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGEVIGVLDI 187

Query: 176 SLLSSPILKASQNLALHLVSATVRRIELANLMAQARNQWVLRFSRSPEFLDVDPEAAISI 235
           +     + +   +L+  +++A      L  L     +Q VL F   P++L+      +++
Sbjct: 188 TR-EGVMAQPQDSLSTLMLAAGNIESRLFGLCHP--DQLVLAFHSRPQYLNSAWHGLLAL 244

Query: 236 DGLGRIAGMTHAGAKIL-ARSTGLDWRDPQQLIGEP----VSRFFDIEVDNLSDLTRRRP 290
              G +        ++L      L  R    L+GE     ++R +   V ++        
Sbjct: 245 SLDGEVLAANDGACQLLQVPRHELIGRRSTDLLGERSPAFIARLWQGGVSSVQTAKGEFY 304

Query: 291 TRERLVFARDGNALFAHAIEPHSKVRAPLVSREQIPPALRRLGGDAPVIAALQAKAAKLA 350
            R  L   R G       + P +    P +S++   PAL  L G    +A     A +  
Sbjct: 305 FRA-LQLPRHGR------VTPSTPSSKPALSKQS--PALDALAGGDQRLARNLRMARQGL 355

Query: 351 RTRLPILIQGETGTGKEHLARAIHEGSG-LEGPFVAINCAAIPEQLIESELFGYLPGAFT 409
              LP+L+ GETGTGKE +ARA+H+ S   + PFVA+NCAAIPE LIESELFGY  GAFT
Sbjct: 356 GNGLPVLLLGETGTGKEVVARALHQASPRADKPFVAVNCAAIPEGLIESELFGYREGAFT 415

Query: 410 GASAKGRKGLIEQADGGTLFLDEIGDMPLALQSRLLRVLAEGEVLPVGGTAPRKVRIRIV 469
           G+   G  G + QA GGTLFLDEIGDMPLALQ+RLLRVL E  V P+G    + + + ++
Sbjct: 416 GSRRGGMVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGDEQDIDVALI 475

Query: 470 SASHRPLQTLVSQGAFREDLYYRLNAATLTLPALRDRPDFDWVLEQLLKRHGDGELILSP 529
            A+HR L+ LV +  FREDL+YR+N  +L LPALR+R D   +++ LL +     + L P
Sbjct: 476 CATHRDLKRLVQEQHFREDLFYRVNGVSLRLPALRERDDLAAIIQGLLDKADARGVTLDP 535

Query: 530 AALSALKAHDWPGNIRELDNVIGVAAALAENG--VVELGDLPDQL---LANADTVGGNEA 584
           A  + L+  DWPGNIR+L+ V+  A A+ E+G  V+ L  L D L   LA++    G+  
Sbjct: 536 ALTALLEGFDWPGNIRQLEMVVRTALAMREDGEQVLTLDHLTDCLLDELASSAAPSGSLK 595

Query: 585 SATLSL---TLTACNWNISEAARRLGLDRSTVHRQIKRYR 621
            + L      L     N+S AA  LG+ R+T++R++K+ R
Sbjct: 596 DSELEQIRGALARHQGNVSAAAAALGISRATLYRKLKQLR 635