Pairwise Alignments

Query, 309 a.a., rhizopine binding protein from Sinorhizobium meliloti 1021

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Escherichia coli ECOR38

 Score =  115 bits (288), Expect = 1e-30
 Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 12/298 (4%)

Query: 4   LLSAAVLA--LFAGSAHAENVGITIARSDSAFLTILRNGMQDQAAKLDGVTVQVEDAQND 61
           L+SA  L+  + A +   + + + ++  ++ F   L++G Q +A KL G  + V D+QN+
Sbjct: 7   LVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKL-GYNLVVLDSQNN 65

Query: 62  TSRQLDQVQNFVSSGVDAIIVVAVDGDSTPALTKMATDAGIPIVYANHPPADVDKLPETA 121
            +++L  VQ+    G   +++   D D+     KMA  A IP++  +          E  
Sbjct: 66  PAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATK----GEVV 121

Query: 122 AFVGSNEIDSGTLETKEVCRLLGGKGAAYVLMGPLNNHSSLTRTKDIHDVIATDECKGMS 181
           + + S+ +  G +    + +  G       L G     ++  R +     +A  +    +
Sbjct: 122 SHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHK---FN 178

Query: 182 VIEEQSANWDRLEAANIMTNWLSTGREFNAIIANNDEMAIGAIQAMKAAGVDMSKVVVGG 241
           V+  Q A++DR +  N+M N L+   +  A+ A NDEMA+GA++A++ AG   S V+V G
Sbjct: 179 VLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAG--KSDVMVVG 236

Query: 242 IDATPDGLAAMAAGDLDVTVFQNAIAQGAAAMDAAVALSRDQKTARQIWVPFELVTPE 299
            D TPDG  A+  G L  T+ Q     GA  ++ A  + + +K   +  V  +LV  +
Sbjct: 237 FDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ 294